RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 BOLLQ8N9W6 283 aaKnown RBP8.7□□□□□ -1.02
LIG3-212ENST00000590181 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 OR51G2Q8NGK0 314 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 PP6455Q8WZ26 134 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 TMIGD2Q96BF3 282 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 SEMA6AQ9H2E6 1030 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 RIBC2Q9H4K1 309 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 UNKLQ9H9P5 680 aaKnown RBP8.7□□□□□ -1.02
LIG3-212ENST00000590181 RHOFQ9HBH0 211 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 ESM1Q9NQ30 184 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 INPP5EQ9NRR6 644 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 ZNF69Q9UC07 566 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 RPUSD1Q9UJJ7 312 aaKnown RBP8.7□□□□□ -1.02
LIG3-212ENST00000590181 SLC7A11Q9UPY5 501 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 SLC22A13Q9Y226 551 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 PIGLQ9Y2B2 252 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 KLHDC2Q9Y2U9 406 aa8.7□□□□□ -1.02
LIG3-212ENST00000590181 A0A0G2JK05 382 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 IGHV3-64DA0A0J9YX35 117 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 A0A1W2PQL4 384 aaPredicted RBP8.69□□□□□ -1.02
LIG3-212ENST00000590181 OR2AT4A6NND4 320 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ZNF732B4DXR9 585 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 M0R1W7 72 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 SIGLEC5O15389 551 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 GYPAP02724 150 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ISG15P05161 165 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 RNASE1P07998 156 aaKnown RBP8.69□□□□□ -1.02
LIG3-212ENST00000590181 MRPL3P09001 348 aaKnown RBP8.69□□□□□ -1.02
LIG3-212ENST00000590181 HKR1P10072 659 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 GLRA1P23415 457 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 EPHA2P29317 976 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 CCR9P51686 369 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 FGF12P61328 243 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ACTA2P62736 377 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ACTG2P63267 376 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 PLCXD3Q63HM9 321 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 NCR3LG1Q68D85 454 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 SHISA2Q6UWI4 295 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ZNF771Q7L3S4 317 aaPredicted RBP8.69□□□□□ -1.02
LIG3-212ENST00000590181 WDR86Q86TI4 376 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 CATSPERDQ86XM0 798 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 CALHM1Q8IU99 346 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 Q8IYB0 196 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ZNF561Q8N587 486 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ZDHHC22Q8N966 263 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 DNAAF1Q8NEP3 725 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 OR5D13Q8NGL4 314 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ANGPTL6Q8NI99 470 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 PYDC1Q8WXC3 89 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 AQP3Q92482 292 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 EME1Q96AY2 570 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 SDSLQ96GA7 329 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 APOL4Q9BPW4 351 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 ZNF747Q9BV97 191 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 PKIBQ9C010 78 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 PLEKHA1Q9HB21 404 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 NLKQ9UBE8 527 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 MRM2Q9UI43 246 aaKnown RBP8.69□□□□□ -1.02
LIG3-212ENST00000590181 COPS3Q9UNS2 423 aa8.69□□□□□ -1.02
LIG3-212ENST00000590181 E9PQ18 207 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 J3QT63 122 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SLC1A7O00341 560 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SYT7O43581 403 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 FADS2O95864 444 aaKnown RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 MMP9P14780 707 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ANOS1P23352 680 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 EEF1B2P24534 225 aaKnown RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 MPZP25189 248 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 FUT6P51993 359 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ISL1P61371 349 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ACSM1Q08AH1 577 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 RAB40BQ12829 278 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 IL24Q13007 206 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 KPNB1Q14974 876 aaKnown RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 KLHL22Q53GT1 634 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 WDR38Q5JTN6 314 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 C16orf87Q6PH81 154 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ZBTB49Q6ZSB9 765 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 MOB3CQ70IA8 216 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ENTHD1Q8IYW4 607 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ACBD7Q8N6N7 88 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SIGLECL1Q8N7X8 197 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 POC1AQ8NBT0 407 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 OR10H4Q8NGA5 316 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SSMEM1Q8WWF3 244 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 HPSE2Q8WWQ2 592 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 ST8SIA4Q92187 359 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 RPL3LQ92901 407 aaKnown RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 ZDHHC16Q969W1 377 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 DCTN5Q9BTE1 182 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 FAM234AQ9H0X4 552 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SIRPDQ9H106 197 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 DPAGT1Q9H3H5 408 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 METTL8Q9H825 291 aaKnown RBP8.68□□□□□ -1.02
LIG3-212ENST00000590181 ACOXLQ9NUZ1 547 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 CTSZQ9UBR2 303 aa8.68□□□□□ -1.02
LIG3-212ENST00000590181 SLC25A10Q9UBX3 287 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms