RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ZNF485Q8NCK3 441 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 C19orf18Q8NEA5 215 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 DEFB108BQ8NET1 73 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 TRMT10AQ8TBZ6 339 aaKnown RBP17.86■□□□□ 0.45
ATG4D-212ENST00000590096 NPRL2Q8WTW4 380 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 SMIM19Q96E16 107 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 TMEM246Q9BRR3 403 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 CDCA4Q9BXL8 241 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 RASSF4Q9H2L5 321 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 PATZ1Q9HBE1 687 aaKnown RBP17.86■□□□□ 0.45
ATG4D-212ENST00000590096 PAK1IP1Q9NWT1 392 aaPredicted RBP17.86■□□□□ 0.45
ATG4D-212ENST00000590096 PCDHGB5Q9Y5G0 923 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 HIVEP2P31629 2446 aa17.86■□□□□ 0.45
ATG4D-212ENST00000590096 FAM230AA0A1W2PPH8 454 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 OOEPA6NGQ2 149 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 CEACAM18A8MTB9 384 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 A8MV72 311 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-212ENST00000590096 RGS10O43665 173 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 LALBAP00709 142 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 LHBP01229 141 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 OCM2P0CE71 109 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 OCMP0CE72 109 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-212ENST00000590096 RPS2P15880 293 aaKnown RBP17.85■□□□□ 0.45
ATG4D-212ENST00000590096 CRHBPP24387 322 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 CFHR2P36980 270 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 HAAOP46952 286 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 UBE2V2Q15819 145 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 HAGHLQ6PII5 290 aaPredicted RBP17.85■□□□□ 0.45
ATG4D-212ENST00000590096 UTS2BQ765I0 119 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 OR51F2Q8NH61 342 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 ZNF671Q8TAW3 534 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 RPS4Y2Q8TD47 263 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 GPR148Q8TDV2 347 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 BORCS8Q96FH0 119 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 DUSP21Q9H596 190 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 LPAR2Q9HBW0 351 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 MIOXQ9UGB7 285 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 KCNS2Q9ULS6 477 aa17.85■□□□□ 0.45
ATG4D-212ENST00000590096 PQLC2LA1A4F0 135 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 SRRM5B3KS81 715 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 DENRO43583 198 aaKnown RBP17.84■□□□□ 0.45
ATG4D-212ENST00000590096 EGR1P18146 543 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 FUT6P51993 359 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 HOXA4Q00056 320 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-212ENST00000590096 MICBQ29980 383 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 DCDC5Q6ZRR9 648 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 ZFP41Q8N8Y5 198 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 SGCDQ92629 289 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 CCDC90BQ9GZT6 254 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 ZNF281Q9Y2X9 895 aa17.84■□□□□ 0.45
ATG4D-212ENST00000590096 SIRT4Q9Y6E7 314 aaPredicted RBP17.84■□□□□ 0.45
ATG4D-212ENST00000590096 J3QT63 122 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 CD2P06729 351 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 MSMBP08118 114 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 ATF1P18846 271 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 PRKACBP22694 351 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 CPT2P23786 658 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 EEF1B2P24534 225 aaKnown RBP17.83■□□□□ 0.44
ATG4D-212ENST00000590096 GMFBP60983 142 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 DMKNQ6E0U4 476 aaPredicted RBP17.83■□□□□ 0.44
ATG4D-212ENST00000590096 NLRC3Q7RTR2 1065 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 GLCCI1Q86VQ1 547 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 SERPINA12Q8IW75 414 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 OR8B3Q8NGG8 313 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 AQP3Q92482 292 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 OR8B2Q96RD0 313 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 NEK6Q9HC98 313 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 DNAJB11Q9UBS4 358 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 POLDIP2Q9Y2S7 368 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 MALRD1Q5VYJ5 2156 aa17.83■□□□□ 0.44
ATG4D-212ENST00000590096 PNMA8CA0A1B0GUJ8 204 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 F5H0A9 414 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-212ENST00000590096 AKR7A2O43488 359 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 NDUFA2O43678 99 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 RHBDL1O75783 438 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 MUC1P15941 1255 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-212ENST00000590096 SOX2P48431 317 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 RBP2P50120 134 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 ATP1B3P54709 279 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 BDH1Q02338 343 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 ESCO2Q56NI9 601 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 TEX36Q5VZQ5 186 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 PRSS48Q7RTY5 328 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 DNAAF1Q8NEP3 725 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 OR5D14Q8NGL3 314 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 OR13C9Q8NGT0 318 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 RGP1Q92546 391 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-212ENST00000590096 GHSRQ92847 366 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 NEIL1Q96FI4 390 aaPredicted RBP17.82■□□□□ 0.44
ATG4D-212ENST00000590096 ZCCHC4Q9H5U6 513 aa17.82■□□□□ 0.44
ATG4D-212ENST00000590096 IGHV3OR15-7A0A075B7D8 119 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 FOXH1O75593 365 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 GYPAP02724 150 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 MT-ND2P03891 347 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 WNT2P09544 360 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 CELP19835 753 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 GLRA1P23415 457 aa17.81■□□□□ 0.44
ATG4D-212ENST00000590096 AZGP1P25311 298 aaKnown RBP17.81■□□□□ 0.44
ATG4D-212ENST00000590096 DVL1P1P54792 670 aaPredicted RBP17.81■□□□□ 0.44
ATG4D-212ENST00000590096 IRF3Q14653 427 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms