RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 BORCS8Q96FH0 119 aa16.7■□□□□ 0.26
PRKCSH-209ENST00000589838 TECTBQ96PL2 329 aa16.7■□□□□ 0.26
PRKCSH-209ENST00000589838 PLEKHJ1Q9NW61 149 aa16.7■□□□□ 0.26
PRKCSH-209ENST00000589838 MYO7BQ6PIF6 2116 aa16.7■□□□□ 0.26
PRKCSH-209ENST00000589838 A0A1B0GW55 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 XRCC2O43543 280 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SYNGR4O95473 234 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SFT2D2O95562 160 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 F10P00742 488 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 NRASP01111 189 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SERPINA5P05154 406 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L2P0CJ85 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L3P0CJ86 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L4P0CJ87 422 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L5P0CJ88 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L6P0CJ89 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4L7P0CJ90 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SURF2Q15527 256 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 TMEM42Q69YG0 159 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ZNF660Q6AZW8 331 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ABHD3Q8WU67 409 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SLC39A7Q92504 469 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 RBPMSQ93062 196 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ZNF845Q96IR2 970 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ZNF703Q9H7S9 590 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 PCDHB16Q9NRJ7 776 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 EHFQ9NZC4 300 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 DUX4Q9UBX2 424 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 PFDN2Q9UHV9 154 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ATPIF1Q9UII2 106 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 EDARQ9UNE0 448 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SESN1Q9Y6P5 492 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 FAM230AA0A1W2PPH8 454 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 C5orf51A6NDU8 294 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 TERTO14746 1132 aaKnown RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 HTR3BO95264 441 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 RGS7BPQ6MZT1 257 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ASCL4Q6XD76 172 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SKA3Q8IX90 412 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 OR13G1Q8NGZ3 307 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 NMES1Q9C002 83 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 C5orf66Q9H5L9 145 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 HSF4Q9ULV5 492 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 SLC7A11Q9UPY5 501 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 OSGIN2Q9Y236 505 aa16.69■□□□□ 0.26
PRKCSH-209ENST00000589838 ZDBF2Q9HCK1 2354 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 NMBP08949 121 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 GABRR1P24046 479 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 ITGA3P26006 1051 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 ATP1B3P54709 279 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 HGFACQ04756 655 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 AIMP2Q13155 320 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 OR1C1Q15619 314 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 DCAF10Q5QP82 559 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 PDZD9Q8IXQ8 264 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 INO80EQ8NBZ0 244 aaPredicted RBP16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 OR5M9Q8NGP3 310 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 LRRC20Q8TCA0 184 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 EMG1Q92979 244 aaKnown RBP16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 RAB18Q9NP72 206 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 SPEGQ15772 3267 aa16.68■□□□□ 0.26
PRKCSH-209ENST00000589838 BCL2L11O43521 198 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 CRYZL1O95825 349 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 PATE4P0C8F1 98 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 LHX2P50458 406 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 FUT6P51993 359 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 CAMK2BQ13554 666 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 LRRC37A5PQ49AS3 106 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 OVCH2Q7RTZ1 564 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 MRPS24Q96EL2 167 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 SIGLEC12Q96PQ1 595 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 VRK1Q99986 396 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 EEF1E1-BLOC1S5C9J1V9 151 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 CDK2AP1O14519 115 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 RRP8O43159 456 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 MMP7P09237 267 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 PSMB6P28072 239 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 SERPINF1P36955 418 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 PLEKHN1Q494U1 663 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 ADAMTS17Q8TE56 1095 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 ST8SIA2Q92186 375 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 TMEM230Q96A57 120 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 PRDM14Q9GZV8 571 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 SLC25A32Q9H2D1 315 aa16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 ZNF701Q9NV72 531 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 MCTS1Q9ULC4 181 aaKnown RBP16.67■□□□□ 0.26
PRKCSH-209ENST00000589838 hCG_38984A0A1B0GV85 526 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 C13orf42A0A1B0GVH6 325 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 CDX4O14627 284 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 SPDEFO95238 335 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 FAM3AP98173 230 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 TSPO2Q5TGU0 170 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 AADACL3Q5VUY0 350 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 C6orf201Q7Z4U5 140 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 RTBDNQ9BSG5 229 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 RNF122Q9H9V4 155 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 CHMP1AQ9HD42 196 aaPredicted RBP16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 SDHAF2Q9NX18 166 aa16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 C14orf166Q9Y224 244 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-209ENST00000589838 ZNF816-ZNF321PA0A0X1KG74 233 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms