RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LRFN4Q6PJG9 635 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 RFPL4BQ6ZWI9 263 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 DPY19L4Q7Z388 723 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 KCTD20Q7Z5Y7 419 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ZNF511Q8NB15 262 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 Q8NFD4 153 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 BBS1Q8NFJ9 593 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 SLC26A10Q8NG04 563 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 OR2T27Q8NH04 317 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 OR2T6Q8NHC8 308 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 SLC25A40Q8TBP6 338 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ITLN1Q8WWA0 313 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PTP4A1Q93096 173 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 TMEM80Q96HE8 168 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 COG8Q96MW5 612 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 NR1H4Q96RI1 486 aaPredicted RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 OR2J1Q9GZK6 312 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 AMBNQ9NP70 447 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PALMDQ9NP74 551 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 EMC7Q9NPA0 242 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 CENPMQ9NSP4 180 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PLCXD1Q9NUJ7 323 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 EIF3KQ9UBQ5 218 aaKnown RBP4.97□□□□□ -1.61
VPS25-204ENST00000589577 CTSZQ9UBR2 303 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 CLN8Q9UBY8 286 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 MIOXQ9UGB7 285 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 ATPIF1Q9UII2 106 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 PPP1R3CQ9UQK1 317 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 LRRC42Q9Y546 428 aa4.97□□□□□ -1.61
VPS25-204ENST00000589577 A0A087WXM4 84 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 A0A1W2PRX2 142 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 BTBD17A6NE02 478 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CCDC182A6NF36 153 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 DCTN6O00399 190 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CHST1O43916 411 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 SELENOFO60613 162 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF254O75437 659 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 WBP4O75554 376 aaKnown RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 CYB5R3P00387 301 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 LHBP01229 141 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CHRM2P08172 466 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 FBP1P09467 338 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF32P17041 273 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CCNOP22674 350 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 SLC2A5P22732 501 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 RGS6P49758 472 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 GBX2P52951 348 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 TPTEP56180 551 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 HOXA4Q00056 320 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 ST3GAL4Q11206 333 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 DCTN2Q13561 401 aaKnown RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 KCNMB1Q16558 191 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 MEP1BQ16820 701 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF718Q3SXZ3 478 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 KCTD21Q4G0X4 260 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 DEGS2Q6QHC5 323 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF322Q6U7Q0 402 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 FOXL2NBQ6ZUU3 175 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 DCXRQ7Z4W1 244 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 BCDIN3DQ7Z5W3 292 aaKnown RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 EGFL6Q8IUX8 553 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 LINC00346Q8IVM7 164 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 TIGD4Q8IY51 512 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 YIPF7Q8N8F6 280 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 OR8B3Q8NGG8 313 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 OR4C13Q8NGP0 309 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 OTOSQ8NHW6 89 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF420Q8TAQ5 688 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 FCGR1BQ92637 280 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 NMD3Q96D46 503 aaKnown RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 LGALS12Q96DT0 336 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 RCHY1Q96PM5 261 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 OR8B2Q96RD0 313 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 TBX5Q99593 518 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ATF6BQ99941 703 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ALG8Q9BVK2 526 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 MND1Q9BWT6 205 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 HCAR1Q9BXC0 346 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 RANBP3Q9H6Z4 567 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 ZNF702PQ9H963 129 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ELOVL3Q9HB03 270 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 ADGRL4Q9HBW9 690 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 TRIM36Q9NQ86 728 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CYSLTR2Q9NS75 346 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 CGGBP1Q9UFW8 167 aaPredicted RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 PSORS1C1Q9UIG5 152 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 GTF2A1LQ9UNN4 478 aa4.96□□□□□ -1.62
VPS25-204ENST00000589577 DIMT1Q9UNQ2 313 aaKnown RBP4.96□□□□□ -1.62
VPS25-204ENST00000589577 LOC100509620A0A075B734 347 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 IGKV1D-43A0A0B4J1Z2 117 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 MAGEA13PA6NCF6 341 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 METTL15A6NJ78 407 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 H3BUX3 64 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 J3QW42 95 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 M0R135 149 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 SULT1C4O75897 302 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 APOL3O95236 402 aa4.95□□□□□ -1.62
VPS25-204ENST00000589577 DUS4LO95620 317 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms