RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 OR5AR1Q8NGP9 310 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR13C8Q8NGS7 320 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR5AK2Q8NH90 309 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 RNASE11Q8TAA1 199 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 PHOSPHO1Q8TCT1 267 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PAQR8Q8TEZ7 354 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PPP1R1CQ8WVI7 109 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GAL3ST3Q96A11 431 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PTX4Q96A99 478 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MS4A6EQ96DS6 147 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 C16orf58Q96GQ5 468 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZNF681Q96N22 645 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 IL17FQ96PD4 163 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR5B2Q96R09 309 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PDCD1LG2Q9BQ51 273 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PIGQQ9BRB3 760 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 NUDT16L1Q9BRJ7 211 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 ADAT1Q9BUB4 502 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 TTTY10Q9BZA0 68 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 TRIM2Q9C040 744 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 TLNRD1Q9H1K6 362 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MKKSQ9NPJ1 570 aaPredicted RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 PARP11Q9NR21 331 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 DUSP22Q9NRW4 184 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CUTCQ9NTM9 273 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 C20orf141Q9NUB4 165 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PPP1R14DQ9NXH3 145 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
LIG3-211ENST00000588713 TREM2Q9NZC2 230 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 PPP4R1LQ9P1A2 415 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 GHRLQ9UBU3 117 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 SHPKQ9UHJ6 478 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 MOKQ9UQ07 419 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 OR10H1Q9Y4A9 318 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 FAM215AQ9Y5M1 114 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 KCNE3Q9Y6H6 103 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 ZNF780BQ9Y6R6 833 aa3.64□□□□□ -1.83
LIG3-211ENST00000588713 CENPVL1A0A0U1RR11 272 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 FEZF1A0PJY2 475 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 DBX1A6NMT0 343 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 OR4C45A6NMZ5 311 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF705EA8MWA4 302 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF736B4DX44 427 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 EEF1E1-BLOC1S5C9J1V9 151 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 C4orf51C9J302 202 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 TAAR5O14804 337 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF208O43345 1280 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PPIHO43447 177 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 PRKRAO75569 313 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 UPK3AO75631 287 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 DUS4LO95620 317 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 CYB5AP00167 134 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 GAPDHP04406 335 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 GYPBP06028 91 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 CD5P06127 495 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 OR8U8P0C7N1 319 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 SLC35G4P0C7Q5 338 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF735P0CB33 412 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 COX6A1P12074 109 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 MUC1P15941 1255 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 HIST1H1CP16403 213 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 FUT1P19526 365 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 RAB6AP20340 208 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 CPT2P23786 658 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PSMB6P28072 239 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PSMB5P28074 263 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 SDHAP31040 664 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PSMB10P40306 273 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 BCL6P41182 706 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 MAGEB1P43366 347 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 SULT1A2P50226 295 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PPT1P50897 306 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 DVL1P1P54792 670 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 RAB1AP62820 205 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 FABP9Q0Z7S8 132 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PPP1R1AQ13522 171 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 FHL1Q13642 323 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 DUSP5Q16690 384 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 KLHL26Q53HC5 615 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 RNASE10Q5GAN6 216 aaKnown RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 OR2B11Q5JQS5 317 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ACER2Q5QJU3 275 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 LINC01590Q5TEZ4 76 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 RTL6Q6ICC9 239 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF425Q6IV72 752 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PRSS54Q6PEW0 395 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ADAMTSL4Q6UY14 1074 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF550Q7Z398 422 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 TMED4Q7Z7H5 227 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 NAA40Q86UY6 237 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 AMZ2Q86W34 360 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF584Q8IVC4 421 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZNF547Q8IVP9 402 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ZFP82Q8N141 532 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 BPIFB2Q8N4F0 458 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 PAQR4Q8N4S7 273 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 METTL27Q8N6F8 245 aaPredicted RBP3.63□□□□□ -1.83
LIG3-211ENST00000588713 NKAIN3Q8N8D7 197 aa3.63□□□□□ -1.83
LIG3-211ENST00000588713 ACOT4Q8N9L9 421 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms