RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 WDFY2Q96P53 400 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 SLC30A2Q9BRI3 323 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 SAP30LQ9HAJ7 183 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 PLGRKTQ9HBL7 147 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 DECR2Q9NUI1 292 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 TAS2R4Q9NYW5 299 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 ABRACLQ9P1F3 81 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 TANC2Q9HCD6 1990 aa17.1■□□□□ 0.33
ATG4D-208ENST00000588667 LOC390937A0A1W2PQ73 354 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 MEGF11A6BM72 1044 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 GGT3PA6NGU5 568 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 IFITM5A6NNB3 132 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 CD300LBA8K4G0 201 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 AIPO00170 330 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 NDUFS8O00217 210 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 DHRS3O75911 302 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 IGFBP3P17936 291 aaPredicted RBP17.09■□□□□ 0.33
ATG4D-208ENST00000588667 ADRA2CP18825 462 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 TNFSF4P23510 183 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 GNALP38405 381 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 ZNF45Q02386 682 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 TNK1Q13470 666 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 MFSD4AQ8N468 514 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 OR2Z1Q8NG97 314 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 OR13G1Q8NGZ3 307 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 C10orf105Q8TEF2 133 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 ELMOD3Q96FG2 381 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 MRI1Q9BV20 369 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 EGLN1Q9GZT9 426 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 ABCB9Q9NP78 766 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 ADAM30Q9UKF2 790 aa17.09■□□□□ 0.33
ATG4D-208ENST00000588667 IGHV4-30-2A0A087WSY4 118 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 hCG_38984A0A1B0GV85 526 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 A0A1B0GWJ7 208 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 TPD52L2O43399 206 aaKnown RBP17.08■□□□□ 0.32
ATG4D-208ENST00000588667 LMX1BO60663 402 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 LILRA1O75019 489 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 ATF1P18846 271 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 TNFSF8P32971 234 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 THBS2P35442 1172 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 DDOSTP39656 456 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 FAM3AP98173 230 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
ATG4D-208ENST00000588667 ASPHD2Q6ICH7 369 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 Q6ZSR3 168 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 LAX1Q8IWV1 398 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 OR56B2PQ8NGI1 322 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 OR14K1Q8NGZ2 314 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 RDH5Q92781 318 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 BORCS5Q969J3 196 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 LYZL4Q96KX0 146 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 GFI1Q99684 422 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 TMUB1Q9BVT8 246 aa17.08■□□□□ 0.32
ATG4D-208ENST00000588667 SLC2A2P11168 524 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-208ENST00000588667 ETV6P41212 452 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 TNFAIP6P98066 277 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-208ENST00000588667 CARTPTQ16568 116 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 CCDC190Q86UF4 302 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 NKAIN3Q8N8D7 197 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 C10orf35Q96D05 121 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 ADAT3Q96EY9 351 aaPredicted RBP17.07■□□□□ 0.32
ATG4D-208ENST00000588667 PIMREGQ9BSJ6 248 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 SLC22A4Q9H015 551 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 TMEM100Q9NV29 134 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 V9GYS6 101 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 CR1P17927 2039 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 DHRS7CA6NNS2 312 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 CD99P14209 185 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 SLC25A16P16260 332 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 GLT8D1Q68CQ7 371 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 OR10AD1Q8NGE0 317 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 ZNF671Q8TAW3 534 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 SOX7Q9BT81 388 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 MRPL15Q9P015 296 aaKnown RBP17.07■□□□□ 0.32
ATG4D-208ENST00000588667 IL19Q9UHD0 177 aa17.07■□□□□ 0.32
ATG4D-208ENST00000588667 NOP16Q9Y3C1 178 aaKnown RBP17.07■□□□□ 0.32
ATG4D-208ENST00000588667 TEP1Q99973 2627 aaKnown RBP17.06■□□□□ 0.32
ATG4D-208ENST00000588667 H7C1Q1 480 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 MLNRO43193 412 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 RAB3AP20336 220 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 GIFP27352 417 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 CFPP27918 469 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 GSK3AP49840 483 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 OR8B8Q15620 311 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 DNAAF1Q8NEP3 725 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 OR1M1Q8NGA1 313 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 TRMT10AQ8TBZ6 339 aaKnown RBP17.06■□□□□ 0.32
ATG4D-208ENST00000588667 MIXL1Q9H2W2 232 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 CHODLQ9H9P2 273 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 TMEM138Q9NPI0 162 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 DLL4Q9NR61 685 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 DYSFO75923 2080 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 TLN2Q9Y4G6 2542 aa17.06■□□□□ 0.32
ATG4D-208ENST00000588667 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 ZANQ9Y493 2812 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 IGHV1-69-2A0A0G2JMI3 117 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 LYNX1G3V0Z9 82 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 HPGDSO60760 199 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 LYNX1P0DP58 116 aa17.05■□□□□ 0.32
ATG4D-208ENST00000588667 HES5Q5TA89 166 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms