RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, human

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBD1-208	ENST00000588009	TSNAX	Q99598	290 aa	Known RBP	3.59	□□□□□ -1.83
TUBD1-208	ENST00000588009	ULBP2	Q9BZM5	246 aa		3.59	□□□□□ -1.83
TUBD1-208	ENST00000588009	LRPPRC	P42704	1394 aa	Known RBP	3.59	□□□□□ -1.83
TUBD1-208	ENST00000588009	ADAMTS13	Q76LX8	1427 aa		3.59	□□□□□ -1.84
TUBD1-208	ENST00000588009	NCOR2	Q9Y618	2525 aa		3.59	□□□□□ -1.84
TUBD1-208	ENST00000588009	DOPEY1	Q5JWR5	2465 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGHV5-10-1	A0A0J9YXX1	117 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TVP23A	A6NH52	213 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009		K7EN84	100 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	GATC	O43716	136 aa	Known RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	DTYMK	P23919	212 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	GNRHR	P30968	328 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TALDO1	P37837	337 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	KCNJ3	P48549	501 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	RPL23	P62829	140 aa	Known RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	KDSR	Q06136	332 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	XRCC4	Q13426	336 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	MAD2L1BP	Q15013	274 aa	Predicted RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR1Q1	Q15612	314 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TNXA	Q16473	311 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	KRT71	Q3SY84	523 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TMEM31	Q5JXX7	168 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	FBXW9	Q5XUX1	488 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	SMIM5	Q71RC9	77 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	COPS6	Q7L5N1	327 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR6K2	Q8NGY2	324 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR10G6	Q8NH81	332 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	CPB2	Q96IY4	423 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	FAM19A4	Q96LR4	140 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	HSD17B10	Q99714	261 aa	Known RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	SAMD10	Q9BYL1	202 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	ARV1	Q9H2C2	271 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	OR51B5	Q9H339	312 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TPK1	Q9H3S4	243 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNF442	Q9H7R0	627 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	WSB1	Q9Y6I7	421 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	ABCA12	Q86UK0	2595 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	CRB1	P82279	1406 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	ATP7B	P35670	1465 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	C2orf16	Q68DN1	1984 aa		3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	MAP1B	P46821	2468 aa	Known RBP	3.58	□□□□□ -1.84
TUBD1-208	ENST00000588009	TRAV8-7	A0A075B6U6	113 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009		A0A096LNJ9	63 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGHV2OR16-5	A0A0B4J2B6	119 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009		A0A1B0GW15	77 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	GOLGA8J	A6NMD2	632 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	TMX2-CTNND1	H3BSU7	103 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	BRD4	O60885	1362 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	TTC4	O95801	387 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	GOLGA8H	P0CJ92	632 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGHV1-8	P0DP01	117 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	PSG2	P11465	335 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	MDK	P21741	143 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	LOX	P28300	417 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	POLR2I	P36954	125 aa	Known RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	PPOX	P50336	477 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNF133	P52736	654 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	GFER	P55789	205 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	MLF1	P58340	268 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	C2orf54	Q08AI8	447 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	MADCAM1	Q13477	382 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	RBMY1F	Q15415	496 aa	Known RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	USF2	Q15853	346 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009		Q6ZVH6	145 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	N4BP2	Q86UW6	1770 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	C15orf40	Q8WUR7	153 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	RDH12	Q96NR8	316 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	SULT4A1	Q9BR01	284 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	CLEC2D	Q9UHP7	191 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	CELA1	Q9UNI1	258 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	CFL2	Q9Y281	166 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	POFUT2	Q9Y2G5	429 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	NOSIP	Q9Y314	301 aa	Known RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	SIGLEC9	Q9Y336	463 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	HYOU1	Q9Y4L1	999 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	TSSC4	Q9Y5U2	329 aa	Predicted RBP	3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	MYO18B	Q8IUG5	2567 aa		3.57	□□□□□ -1.84
TUBD1-208	ENST00000588009	PTPRZ1	P23471	2315 aa	Predicted RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	SBF1	O95248	1867 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	PARP4	Q9UKK3	1724 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	PLEKHH2	Q8IVE3	1493 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	TNS3	Q68CZ2	1445 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	ITPR3	Q14573	2671 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	MAP3K19	Q56UN5	1328 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	TRAV19	A0A0A6YYK7	116 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	GOLGA8Q	A0A0J9YX86	632 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	MGAT4D	A6NG13	374 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	REM1	O75628	298 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	UPK1B	O75841	260 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	CST4	P01036	141 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	SPAM1	P38567	509 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	SLC35A1	P78382	337 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	STX3	Q13277	289 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	DYNC1I2	Q13409	638 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	SNRNP35	Q16560	246 aa	Known RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	ZNF658B	Q4V348	819 aa	Predicted RBP	3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	HSP90B2P	Q58FF3	399 aa		3.56	□□□□□ -1.84
TUBD1-208	ENST00000588009	FAM27D1	Q5T7N8	215 aa		3.56	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms