RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PPP1R14BQ96C90 147 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 OR2J1Q9GZK6 312 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 CRIM1Q9NZV1 1036 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 COPZ2Q9P299 210 aa17.07■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF629Q9UEG4 869 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-204ENST00000587339 A0A0G2JNJ9 132 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 A8MXE2 369 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 EEF1E1-BLOC1S5C9J1V9 151 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 SOCS1O15524 211 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF780AO75290 641 aaPredicted RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 IGLV1-44P01699 117 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 CECR9P0C854 216 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 GNB3P16520 340 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 PSMB1P20618 241 aaKnown RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 PDZK1IP1Q13113 114 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 TIMM23BQ5SRD1 257 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 OR2T2Q6IF00 324 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 UNQ6126/PRO20091Q6UXV3 157 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 FAM89BQ8N5H3 189 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 OR1J1Q8NGS3 322 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 S100PBPQ96BU1 408 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 HIST1H2AAQ96QV6 131 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 Q9UFV3 132 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 SLC25A15Q9Y619 301 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 TLN1Q9Y490 2541 aaKnown RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 RP1L1Q8IWN7 2480 aaPredicted RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 MELTFP08582 738 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF35P13682 527 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 FAUP35544 74 aaKnown RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 CCR6P51684 374 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 ASCL4Q6XD76 172 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF554Q86TJ5 538 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 FAM169BQ8N8A8 192 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 HPSE2Q8WWQ2 592 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 PIGMQ9H3S5 423 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 MOV10Q9HCE1 1003 aaKnown RBP17.06■□□□□ 0.32
TRIM47-204ENST00000587339 MCUBQ9NWR8 336 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 MPC1Q9Y5U8 109 aa17.06■□□□□ 0.32
TRIM47-204ENST00000587339 ZZEF1O43149 2961 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 PQLC2LA1A4F0 135 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 HTR3BO95264 441 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 TCRBP04435 133 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 GTF2F2P13984 249 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 CPT2P23786 658 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 ERVS71-1P61550 626 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 PLAC9Q5JTB6 97 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 AGAP6Q5VW22 663 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 OLFML2AQ68BL7 652 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 CALHM1Q8IU99 346 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 PXT1Q8NFP0 134 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 TM2D1Q9BX74 207 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 NUDT15Q9NV35 164 aa17.05■□□□□ 0.32
TRIM47-204ENST00000587339 INMT-MINDY4F8WBC2 141 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 LILRA1O75019 489 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 FCER2P06734 321 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 HNRNPCP07910 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 HIST1H1DP16402 221 aaKnown RBP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 GPM6AP51674 278 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 TMEM50BP56557 158 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 TMEM255AQ5JRV8 349 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 SFRP4Q6FHJ7 346 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 FAAP20Q6NZ36 180 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 FJX1Q86VR8 437 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF611Q8N823 705 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 DRAXINQ8NBI3 349 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 OR5A2Q8NGI9 324 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 OR51F2Q8NH61 342 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 SLC25A40Q8TBP6 338 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 NUBP2Q9Y5Y2 271 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 IGHV1-18A0A0C4DH31 117 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 GSTP1P09211 210 aaKnown RBP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 RAC2P15153 192 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 RAD52P43351 418 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 TATDN3Q17R31 274 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 MRGPRGQ86SM5 289 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 DVL3Q92997 716 aaPredicted RBP17.04■□□□□ 0.32
TRIM47-204ENST00000587339 MUCL1Q96DR8 90 aa17.04■□□□□ 0.32
TRIM47-204ENST00000587339 A0A0B4J293 547 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 IGKV1-12A0A0C4DH73 117 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 ZNF732B4DXR9 585 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 CYB5AP00167 134 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 IGKV1D-12P01611 117 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 BLVRBP30043 206 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-204ENST00000587339 HAAOP46952 286 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 NCCRP1Q6ZVX7 275 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-204ENST00000587339 TRAPPC6BQ86SZ2 158 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 OR8S1Q8NH09 359 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 NUDCD2Q8WVJ2 157 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 OR5P3Q8WZ94 311 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 ARHGAP5-AS1Q96IT6 56 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 Q96M66 194 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 FGF23Q9GZV9 251 aaPredicted RBP17.03■□□□□ 0.32
TRIM47-204ENST00000587339 PCDHB16Q9NRJ7 776 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 IL36GQ9NZH8 169 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 KCNK7Q9Y2U2 307 aa17.03■□□□□ 0.32
TRIM47-204ENST00000587339 ZGRF1Q86YA3 2104 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 TRAV6A0A075B6T7 132 aa17.02■□□□□ 0.32
TRIM47-204ENST00000587339 CD3DP04234 171 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms