RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 C8orf46Q8TAG6 207 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 LYZL4Q96KX0 146 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 SSX3Q99909 188 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 PAPOLGQ9BWT3 736 aaKnown RBP9.48□□□□□ -0.89
LIG3-207ENST00000586119 TLNRD1Q9H1K6 362 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 CMC2Q9NRP2 79 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 FBLN5Q9UBX5 448 aa9.48□□□□□ -0.89
LIG3-207ENST00000586119 NKX1-2Q9UD57 310 aaPredicted RBP9.48□□□□□ -0.89
LIG3-207ENST00000586119 BTBD17A6NE02 478 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 E9PQ18 207 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 ZNF3P17036 446 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 NDUFB7P17568 137 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 PAICSP22234 425 aaKnown RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 EEF1B2P24534 225 aaKnown RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 PEX2P28328 305 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 HSD11B1P28845 292 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 GABRA5P31644 462 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 NAA10P41227 235 aaPredicted RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 GABRA2P47869 451 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 UBE2E1P51965 193 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 SLC25A1P53007 311 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 PRDX4Q13162 271 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 HERPUD1Q15011 391 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 C2orf68Q2NKX9 166 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 FBLN7Q53RD9 439 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 LRRC10Q5BKY1 277 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 LPCAT4Q643R3 524 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 C12orf73Q69YU5 71 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 Q6ZPA2 131 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 ERI1Q8IV48 349 aaKnown RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 CMTM4Q8IZR5 234 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 GALNT4Q8N4A0 578 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 ZNRF1Q8ND25 227 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 OR6N2Q8NGY6 317 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 ANGPTL6Q8NI99 470 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 HPSE2Q8WWQ2 592 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 PIGCQ92535 297 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 PGAM5Q96HS1 289 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 RNF170Q96K19 258 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 RIBC2Q9H4K1 309 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 SMPD3Q9NY59 655 aaPredicted RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 SLC25A10Q9UBX3 287 aaPredicted RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 CAB39Q9Y376 341 aaPredicted RBP9.47□□□□□ -0.89
LIG3-207ENST00000586119 MAB21L2Q9Y586 359 aa9.47□□□□□ -0.89
LIG3-207ENST00000586119 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
LIG3-207ENST00000586119 SLC16A6O15403 523 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 PAHP00439 452 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
LIG3-207ENST00000586119 EFNB2P52799 333 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 BLVRAP53004 296 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 CDC42P60953 191 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 GRB2P62993 217 aaKnown RBP9.46□□□□□ -0.9
LIG3-207ENST00000586119 GUCA2AQ02747 115 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 FAM189A2Q15884 450 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 SNAPC1Q16533 368 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 LRRC36Q1X8D7 754 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 SAMD5Q5TGI4 173 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 CRIP3Q6Q6R5 217 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 IQCF1Q8N6M8 205 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 BEND2Q8NDZ0 799 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 ZNF555Q8NEP9 628 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 RNF133Q8WVZ7 376 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 TRUB1Q8WWH5 349 aaKnown RBP9.46□□□□□ -0.9
LIG3-207ENST00000586119 OR5P3Q8WZ94 311 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 OTULINQ96BN8 352 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 HRASLS5Q96KN8 279 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 MICU1Q9BPX6 476 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 OPA3Q9H6K4 179 aa9.46□□□□□ -0.9
LIG3-207ENST00000586119 IGKV1D-17A0A075B6S4 117 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 A0A1W2PQ09 198 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 GPR37O15354 613 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 SIGLEC5O15389 551 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OPN1MWP04001 364 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 OPN1MW2P0DN77 364 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OPN1MW3P0DN78 364 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 VSIG10L2P0DP72 767 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 PSG2P11465 335 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 GSTT1P30711 240 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 DCTDP32321 178 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 POLR2IP36954 125 aaKnown RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 GNALP38405 381 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 OPRL1P41146 370 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 KIR2DS4P43632 304 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 SLC15A1P46059 708 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 HCCSP53701 268 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 EFNB1P98172 346 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 HABP2Q14520 560 aaPredicted RBP9.45□□□□□ -0.9
LIG3-207ENST00000586119 FAM76BQ5HYJ3 339 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 TMEM236Q5W0B7 351 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 TTC23Q5W5X9 447 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 Q6ZTK2 550 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
LIG3-207ENST00000586119 MKXQ8IYA7 352 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms