RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ACSM1Q08AH1 577 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 LRRC75BQ2VPJ9 315 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 MRPL21Q7Z2W9 205 aaKnown RBP14.65□□□□□ -0.06
TOP3A-220ENST00000585031 FAM81AQ8TBF8 368 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 LRRC29Q8WV35 223 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 NKX3-1Q99801 234 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-220ENST00000585031 SLC22A4Q9H015 551 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 NRIP3Q9NQ35 241 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 SCN3BQ9NY72 215 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 TPRKBQ9Y3C4 175 aa14.65□□□□□ -0.06
TOP3A-220ENST00000585031 ZAR1LA6NP61 321 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 C3orf84H3BNL1 204 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 SDHAP31040 664 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 CENPAP49450 140 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 MALLQ13021 153 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 TMPRSS11FQ6ZWK6 438 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 MBOAT2Q6ZWT7 520 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 RNF113BQ8IZP6 322 aaKnown RBP14.64□□□□□ -0.07
TOP3A-220ENST00000585031 Q8N2B8 174 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 OR51G2Q8NGK0 314 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 TMEM5Q9Y2B1 443 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 IER3IP1Q9Y5U9 82 aa14.64□□□□□ -0.07
TOP3A-220ENST00000585031 SMIM31A0A1B0GVY4 71 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 A0A1W2PRX2 142 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 TRIM64CA6NLI5 447 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 H3BN98 237 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 SLC1A7O00341 560 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 CRHBPP24387 322 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 POU1F1P28069 291 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 TSPAN31Q12999 210 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 MICBQ29980 383 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 GLYATL3Q5SZD4 288 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 ZNF773Q6PK81 442 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 WDR82Q6UXN9 313 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 OR6V1Q8N148 313 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 SLC26A10Q8NG04 563 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 H1FXQ92522 213 aaKnown RBP14.63□□□□□ -0.07
TOP3A-220ENST00000585031 MAP6Q96JE9 813 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 OR5M11Q96RB7 305 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 ATF6BQ99941 703 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 PRRG3Q9BZD7 231 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 NPFFR1Q9GZQ6 430 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 WNT10AQ9GZT5 417 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 MRPL15Q9P015 296 aaKnown RBP14.63□□□□□ -0.07
TOP3A-220ENST00000585031 B9D1Q9UPM9 204 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 SIGLEC7Q9Y286 467 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 SNX5Q9Y5X3 404 aa14.63□□□□□ -0.07
TOP3A-220ENST00000585031 GGT3PA6NGU5 568 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 NDUFB3O43676 98 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 MRPS14O60783 128 aaKnown RBP14.62□□□□□ -0.07
TOP3A-220ENST00000585031 MUC1P15941 1255 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-220ENST00000585031 EPHA2P29317 976 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 PTGES3Q15185 160 aaKnown RBP14.62□□□□□ -0.07
TOP3A-220ENST00000585031 STUMQ69YW2 141 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 LNX2Q8N448 690 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 DTX3Q8N9I9 347 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 OR56B2PQ8NGI1 322 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 TEX47Q8TBZ9 253 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 DDOQ99489 341 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 TEX12Q9BXU0 123 aa14.62□□□□□ -0.07
TOP3A-220ENST00000585031 METTL8Q9H825 291 aaKnown RBP14.62□□□□□ -0.07
TOP3A-220ENST00000585031 SRA1Q9HD15 236 aaKnown RBP14.62□□□□□ -0.07
TOP3A-220ENST00000585031 M0R1W7 72 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 TFAP2AP05549 437 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 PSKH1P11801 424 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 HOXD3P31249 432 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 GSSP48637 474 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 RAB13P51153 203 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 EGFEM1PQ0D2K5 195 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 DGUOKQ16854 277 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 ATPAF1Q5TC12 328 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 SLX4IPQ5VYV7 408 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 RASSF6Q6ZTQ3 369 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 SLC36A1Q7Z2H8 476 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 ENTHD1Q8IYW4 607 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 DYNAPQ8N1N2 210 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 BPIFB6Q8NFQ5 453 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 CNIH3Q8TBE1 160 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 FAM46AQ96IP4 442 aaKnown RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 GPX7Q96SL4 187 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 FAM234AQ9H0X4 552 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 WDR13Q9H1Z4 485 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 ELL3Q9HB65 397 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 SNTG1Q9NSN8 517 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 CYB5R1Q9UHQ9 305 aa14.61□□□□□ -0.07
TOP3A-220ENST00000585031 NOP16Q9Y3C1 178 aaKnown RBP14.61□□□□□ -0.07
TOP3A-220ENST00000585031 M0R135 149 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 BHLHE40O14503 412 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 TXNDC12O95881 172 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 RPS27P42677 84 aaKnown RBP14.6□□□□□ -0.07
TOP3A-220ENST00000585031 OMPP47874 163 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 GMFBP60983 142 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 ECH1Q13011 328 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 AANATQ16613 207 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 TMEM95Q3KNT9 176 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 NCR3LG1Q68D85 454 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 GPR139Q6DWJ6 353 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 OR1M1Q8NGA1 313 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
TOP3A-220ENST00000585031 TRUB1Q8WWH5 349 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms