RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 LOC100289279A0A1B0GTE1 492 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SMIM30A4D0T7 59 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR5B21A6NL26 309 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 NOTOA8MTQ0 251 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C17orf100A8MU93 164 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 F5H5P2 479 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 M0R233 179 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 IGHV1-46P01743 117 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SOD3P08294 240 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZNF93P35789 620 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RBP2P50120 134 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 GPM6AP51674 278 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 MZT1Q08AG7 82 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 MAB21L1Q13394 359 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C1orf100Q5SVJ3 147 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C11orf71Q6IPW1 123 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR10AD1Q8NGE0 317 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SLC25A46Q96AG3 418 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 DIRC2Q96SL1 478 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RTL8AQ9BWD3 113 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR51I2Q9H344 312 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 MS4A5Q9H3V2 200 aa13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 FBXO9Q9UK97 447 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CD200P41217 278 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RORCP51449 518 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SNRPD2P62316 118 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 FAM166AQ6J272 317 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 WDR86Q86TI4 376 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CROCCP3Q8IVE0 287 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZCCHC24Q8N2G6 241 aaKnown RBP13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 JAGN1Q8N5M9 183 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ELMOD3Q96FG2 381 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 UQCC2Q9BRT2 126 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TRAF4Q9BUZ4 470 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 BARHL1Q9BZE3 327 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 METTL17Q9H7H0 456 aaPredicted RBP13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CNTD2Q9H8S5 307 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C14orf119Q9NWQ9 140 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 NKIRAS2Q9NYR9 191 aa13.87□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ARFGEF3Q5TH69 2177 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TMEM210A6NLX4 147 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 IFITM5A6NNB3 132 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PTBP3O95758 552 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CD55P08174 381 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZNF182P17025 639 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TNFSF4P23510 183 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CFPP27918 469 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZP1P60852 638 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 HNRNPA0Q13151 305 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CNPY1Q3B7I2 92 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SFXN4Q6P4A7 337 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ANGPTL5Q86XS5 388 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZNF573Q86YE8 665 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C11orf53Q8IXP5 236 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CELF2-AS1Q8N7Q2 184 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SLC25A28Q96A46 364 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RFT1Q96AA3 541 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 MEGF10Q96KG7 1140 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 NKX3-1Q99801 234 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 IL19Q9UHD0 177 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 LAMP3Q9UQV4 416 aa13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RAI1Q7Z5J4 1906 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-228ENST00000583363 LRP5LA4QPB2 252 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 AIPO00170 330 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SLC17A2O00624 439 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TMEM127O75204 238 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 GRPP07492 148 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PTGFRP43088 359 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SRP9P49458 86 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PPOXP50336 477 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TNFAIP6P98066 277 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PDZK1IP1Q13113 114 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RIN1Q13671 783 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SPRNQ5BIV9 151 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 FAM209AQ5JX71 171 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 HES5Q5TA89 166 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 C20orf204Q6ZNR8 217 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CALHM1Q8IU99 346 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR4D6Q8NGJ1 314 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 CPNE2Q96FN4 548 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SORCS2Q96PQ0 1159 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR2V2Q96R30 315 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 GPER1Q99527 375 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 DCUN1D5Q9BTE7 237 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 TLNRD1Q9H1K6 362 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PMF1-BGLAPU3KQ54 211 aa13.85□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZNF469Q96JG9 3925 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 SLC2A2P11168 524 aaPredicted RBP13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 BMP4P12644 408 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 HTR2CP28335 458 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 HAAOP46952 286 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 OR3A4PP47883 348 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ART1P52961 327 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 ZNF154Q13106 437 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 RAB11BQ15907 218 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 PCGF3Q3KNV8 242 aa13.84□□□□□ -0.19
CDK5RAP3-228ENST00000583363 IDNKQ5T6J7 187 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms