RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 IFNA2P01563 188 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 LIMS3P0CW19 117 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 LIMS4P0CW20 117 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 STUMQ69YW2 141 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 KCTD20Q7Z5Y7 419 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 DHRSXQ8N5I4 330 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 AQP3Q92482 292 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 HIST1H2AAQ96QV6 131 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 DCLRE1BQ9H816 532 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 SNTG1Q9NSN8 517 aa16.72■□□□□ 0.27
SS18-218ENST00000581021 RPL36Q9Y3U8 105 aaKnown RBP16.72■□□□□ 0.27
SS18-218ENST00000581021 OR4C45A6NMZ5 311 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 FADS2O95864 444 aaKnown RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 UBCP0CG48 685 aaKnown RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 SELLP14151 372 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 ACTA2P62736 377 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 ACTG2P63267 376 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 PAX8Q06710 450 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 UBE2V2Q15819 145 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 KLF17Q5JT82 389 aaPredicted RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 TTC23Q5W5X9 447 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 HAGHLQ6PII5 290 aaPredicted RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 FAM216BQ8N7L0 139 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 OR5T2Q8NGG2 359 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 ADAT3Q96EY9 351 aaPredicted RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 ZNF488Q96MN9 340 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 CCL13Q99616 98 aa16.71■□□□□ 0.27
SS18-218ENST00000581021 FGF20Q9NP95 211 aaPredicted RBP16.71■□□□□ 0.27
SS18-218ENST00000581021 IGKV1-27A0A075B6S5 117 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 ANKRD61A6NGH8 418 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 SYNGR1O43759 233 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 MUC1P15941 1255 aaPredicted RBP16.7■□□□□ 0.26
SS18-218ENST00000581021 CAPGP40121 348 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 KCNJ8Q15842 424 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 MICBQ29980 383 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 SYS1Q8N2H4 156 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 OR51A4Q8NGJ6 313 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 NPRL2Q8WTW4 380 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 RAB40AQ8WXH6 277 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 TECTBQ96PL2 329 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 JAM3Q9BX67 310 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 TRIM36Q9NQ86 728 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 INPP5EQ9NRR6 644 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 KAAG1Q9UBP8 84 aa16.7■□□□□ 0.26
SS18-218ENST00000581021 DVL1O14640 695 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 TMPRSS2O15393 492 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 HTR1AP08908 422 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 ETV1P50549 477 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 CCR9P51686 369 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 SLC34A1Q06495 639 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 XAF1Q6GPH4 301 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 CALHM1Q8IU99 346 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 TRMT10AQ8TBZ6 339 aaKnown RBP16.69■□□□□ 0.26
SS18-218ENST00000581021 FBLIM1Q8WUP2 373 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 C12orf43Q96C57 262 aaKnown RBP16.69■□□□□ 0.26
SS18-218ENST00000581021 CHST5Q9GZS9 411 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 PLEKHA1Q9HB21 404 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 AUP1Q9Y679 476 aa16.69■□□□□ 0.26
SS18-218ENST00000581021 DOCK11Q5JSL3 2073 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 KIR2DS1A0A191URI9 304 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 NDUFA2O43678 99 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 ISG15P05161 165 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 EPHA1P21709 976 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 HAAOP46952 286 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 IL18R1Q13478 541 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 ALKBH1Q13686 389 aaKnown RBP16.68■□□□□ 0.26
SS18-218ENST00000581021 KLHL22Q53GT1 634 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 ANGPTL6Q8NI99 470 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 GAFA1Q96PS6 74 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 NUDT16L1Q9BRJ7 211 aaKnown RBP16.68■□□□□ 0.26
SS18-218ENST00000581021 ERVK-18Q9QC07 812 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 ZNF222Q9UK12 451 aa16.68■□□□□ 0.26
SS18-218ENST00000581021 IGKV1D-17A0A075B6S4 117 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 IGKV1-9A0A0C4DH69 117 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 H0YAE9 185 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 J3QT63 122 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 RGS9O75916 674 aaPredicted RBP16.67■□□□□ 0.26
SS18-218ENST00000581021 ZFPL1O95159 310 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 MPZP25189 248 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 TGM4P49221 684 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 GTF2A1P52655 376 aaPredicted RBP16.67■□□□□ 0.26
SS18-218ENST00000581021 ATPAF1Q5TC12 328 aaPredicted RBP16.67■□□□□ 0.26
SS18-218ENST00000581021 OR2G6Q5TZ20 316 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 TMEM244Q5VVB8 128 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 ANGPTL5Q86XS5 388 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 BATF2Q8N1L9 274 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 POC1AQ8NBT0 407 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 SETD9Q8NE22 299 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 TFAP2CQ92754 450 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 CLEC2DQ9UHP7 191 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 METRNQ9UJH8 293 aa16.67■□□□□ 0.26
SS18-218ENST00000581021 FAM230AA0A1W2PPH8 454 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 PGA5P0DJD9 388 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 GLRA1P23415 457 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 NPY4RP50391 375 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 AQP4P55087 323 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 DOC2BQ14184 412 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 DGUOKQ16854 277 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 KRTAP24-1Q3LI83 254 aa16.66■□□□□ 0.26
SS18-218ENST00000581021 ZNF788Q6ZQV5 615 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms