RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 HPSE2Q8WWQ2 592 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 ARPC1AQ92747 370 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 RNF170Q96K19 258 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 TMED9Q9BVK6 235 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 HIPK2Q9H2X6 1198 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 GNB4Q9HAV0 340 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 PAPOLBQ9NRJ5 636 aaKnown RBP10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.88□□□□□ -0.671e-7■■□□□ 12.2
CSNK1D-213ENST00000580446 CYB5R1Q9UHQ9 305 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 VPS13DQ5THJ4 4388 aa10.88□□□□□ -0.67
CSNK1D-213ENST00000580446 TRBV5-3A0A0A0MS03 114 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 SLC1A7O00341 560 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 OVOL1O14753 267 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 AHCYL1O43865 530 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 MTRF1O75570 445 aaKnown RBP10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 HLA-DQA2P01906 255 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 GPX2P18283 190 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 PRDX2P32119 198 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 DCTDP32321 178 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 GPM6AP51674 278 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 EDDM3BP56851 147 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 GPR50Q13585 617 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 TBPL2Q6SJ96 375 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 C5orf56Q8N8D9 126 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 OR5P3Q8WZ94 311 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 SGK3Q96BR1 496 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 REEP6Q96HR9 211 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 COPS4Q9BT78 406 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 MRPL22Q9NWU5 206 aaKnown RBP10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 OR14J1Q9UGF5 321 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 HHLA2Q9UM44 414 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 SIRT4Q9Y6E7 314 aaPredicted RBP10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 DYNC1H1Q14204 4646 aaKnown RBP10.87□□□□□ -0.67
CSNK1D-213ENST00000580446 hCG_38984A0A1B0GV85 526 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 ANXA2P2A6NMY6 339 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 C12orf77C9JDV5 145 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 M0QZK8 103 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 VIMP08670 466 aaKnown RBP10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 GSK3AP49840 483 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 SLC18A1P54219 525 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 SLURP1P55000 103 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 MTPNP58546 118 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 CBX1P83916 185 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PRR20EP86478 221 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PRR20CP86479 221 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PRR20DP86480 221 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PRR20BP86481 221 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PRR20AP86496 221 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 TIGD6Q17RP2 521 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 PNLIPRP3Q17RR3 467 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 DRAM2Q6UX65 266 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 CCDC80Q76M96 950 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 MREGQ8N565 214 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 DLX4Q92988 240 aaPredicted RBP10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 ITFG2Q969R8 447 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 ZBTB9Q96C00 473 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 OR52B2Q96RD2 323 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 CLEC7AQ9BXN2 247 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 ALX4Q9H161 411 aaPredicted RBP10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 DPM3Q9P2X0 92 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
CSNK1D-213ENST00000580446 AP4M1O00189 453 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 TK1P04183 234 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 PPIBP23284 216 aaKnown RBP10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 DDOSTP39656 456 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 NANOGP8Q6NSW7 305 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 FOXRED2Q8IWF2 684 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 OR6Q1Q8NGQ2 317 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 SPSB4Q96A44 273 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 CENPMQ9NSP4 180 aa10.85□□□□□ -0.67
CSNK1D-213ENST00000580446 DNAH11Q96DT5 4516 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 MAGEA13PA6NCF6 341 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 TVP23AA6NH52 213 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 A8MZ25 164 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 EVPLLA8MZ36 301 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 XRCC2O43543 280 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 DNAJC8O75937 253 aaPredicted RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ANXA2P07355 339 aaKnown RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 OR8U8P0C7N1 319 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ACKR3P25106 362 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 PRKCDQ05655 676 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ZNF616Q08AN1 781 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 HES1Q14469 280 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 EDDM3AQ14507 147 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ZBED5Q49AG3 693 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 UTF1Q5T230 341 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 PGM2L1Q6PCE3 622 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 PATL1Q86TB9 770 aaKnown RBP10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 LYPD6Q86Y78 171 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 CALHM1Q8IU99 346 aa10.84□□□□□ -0.67
CSNK1D-213ENST00000580446 ZNF561Q8N587 486 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms