RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SLC16A14Q7RTX9 510 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NAXEQ8NCW5 288 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR52H1Q8NGJ2 320 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FBXW5Q969U6 566 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 SHARPINQ9H0F6 387 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CNTD2Q9H8S5 307 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZC4H2Q9NQZ6 224 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF175Q9Y473 711 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM215AQ9Y5M1 114 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PCNX1Q96RV3 2341 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PSG4Q00888 419 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZMYND11Q15326 602 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 DCAF12L2Q5VW00 463 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GJC3Q8NFK1 279 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR1M1Q8NGA1 313 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR8B12Q8NGG6 310 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OR5D14Q8NGL3 314 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CMBLQ96DG6 245 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GMPPAQ96IJ6 420 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GPR84Q9NQS5 396 aa11.04□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MYO7BQ6PIF6 2116 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 IL18BPO95998 194 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CSF1P09603 554 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RAB3AP20336 220 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 H2BFSP57053 126 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 HGFACQ04756 655 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PMPCAQ10713 525 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ZNF273Q14593 569 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OLFML2AQ68BL7 652 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 GLDNQ6ZMI3 551 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 C17orf107Q6ZR85 190 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FAM214BQ7L5A3 538 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 CHST4Q8NCG5 386 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ELMOD3Q96FG2 381 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RBM14Q96PK6 669 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 MICU1Q9BPX6 476 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 NPDC1Q9NQX5 325 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TINAGQ9UJW2 476 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TTLL8A6PVC2 850 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 LYZL6O75951 148 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PRKACAP17612 351 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 DHODHQ02127 395 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 ELFN2Q5R3F8 820 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 FBXW9Q5XUX1 488 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 RGS7BPQ6MZT1 257 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 OVCH2Q7RTZ1 564 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 TAS2R8Q9NYW2 309 aa11.03□□□□□ -0.64
CDK5RAP3-217ENST00000580287 PLSCR5A0PG75 271 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TMEM235A6NFC5 223 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 AHRRA9YTQ3 701 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SGCEO43556 437 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SS18L1O75177 396 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NDUFB6O95139 128 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FCGR2AP12318 317 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TDGF1P3P51864 188 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RIPPLY1Q0D2K3 151 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SLC22A6Q4U2R8 563 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ANKRD39Q53RE8 183 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 METTL11BQ5VVY1 283 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 AWAT2Q6E213 333 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TFAP2EQ6VUC0 442 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF101Q8IZC7 436 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CPEB3Q8NE35 698 aaKnown RBP11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR4S1Q8NGB4 309 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LINC00470Q9BZP3 86 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 A0A1B0GUH1 482 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR14I1A6ND48 311 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 H3BUI4 141 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 HCKP08631 526 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NMBP08949 121 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 AKAIN1P0CW23 69 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CD79AP11912 226 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CFPP27918 469 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TMED4Q7Z7H5 227 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 MUC20Q8N307 709 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 WNT2BQ93097 391 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 FOXRED1Q96CU9 486 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PGAM5Q96HS1 289 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 TINAGL1Q9GZM7 467 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 WNT5BQ9H1J7 359 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 SESN1Q9Y6P5 492 aa11.02□□□□□ -0.65
CDK5RAP3-217ENST00000580287 INTS1Q8N201 2190 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 A0A1B0GTI1 187 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 METTL21EPA6NDL7 271 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 L7N2F9 121 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 LGALS8O00214 317 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NUPL2O15504 423 aaKnown RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ARPC5O15511 151 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PRAF2O60831 178 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 RAD51DO75771 328 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 CCNOP22674 350 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 ZNF93P35789 620 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 OR3A2P47893 321 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NKPD1Q17RQ9 610 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
CDK5RAP3-217ENST00000580287 NSUN5P2Q63ZY6 315 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms