RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 C17orf47Q8NEP4 570 aa13.53□□□□□ -0.24
ITGB4-206ENST00000579662 RNF32Q9H0A6 362 aa13.53□□□□□ -0.24
ITGB4-206ENST00000579662 ESRP2Q9H6T0 727 aaKnown RBP13.53□□□□□ -0.24
ITGB4-206ENST00000579662 XIRP1Q702N8 1843 aaKnown RBP13.53□□□□□ -0.24
ITGB4-206ENST00000579662 GPANK1O95872 356 aa13.52□□□□□ -0.24
ITGB4-206ENST00000579662 PCMT1P22061 227 aa13.52□□□□□ -0.24
ITGB4-206ENST00000579662 PEBP1P30086 187 aaKnown RBP13.52□□□□□ -0.24
ITGB4-206ENST00000579662 ALKBH6Q3KRA9 238 aa13.52□□□□□ -0.24
ITGB4-206ENST00000579662 LRRC3BQ96PB8 259 aa13.52□□□□□ -0.24
ITGB4-206ENST00000579662 RCL1Q9Y2P8 373 aaKnown RBP13.52□□□□□ -0.24
ITGB4-206ENST00000579662 FAM96BQ9Y3D0 163 aa13.52□□□□□ -0.24
ITGB4-206ENST00000579662 OR2M5A3KFT3 312 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 CTAG2O75638 210 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 TMIGD3P0DMS9 266 aaPredicted RBP13.52□□□□□ -0.25
ITGB4-206ENST00000579662 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 H3F3CQ6NXT2 135 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 PPP1R1CQ8WVI7 109 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 ERGIC1Q969X5 290 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 CDC14BO60729 498 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 GZMKP49863 264 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 PPP1CBP62140 327 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 HGDQ93099 445 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 FSCN3Q9NQT6 498 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 PYCARD-AS1I3L0S3 204 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 TRAF3IP2O43734 574 aaPredicted RBP13.52□□□□□ -0.25
ITGB4-206ENST00000579662 NGFP01138 241 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 CST2P09228 141 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 CT45A10P0DMU9 189 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 FBXW5Q969U6 566 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 ARHGAP5-AS1Q96IT6 56 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 HES7Q9BYE0 225 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 OR5V1Q9UGF6 321 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 RNF24Q9Y225 148 aa13.52□□□□□ -0.25
ITGB4-206ENST00000579662 TXNL1O43396 289 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 CA6P23280 308 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 MESTQ5EB52 335 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 DMKNQ6E0U4 476 aaPredicted RBP13.51□□□□□ -0.25
ITGB4-206ENST00000579662 Q7L0L9 218 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 POM121L2Q96KW2 1035 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 TINAGL1Q9GZM7 467 aaPredicted RBP13.51□□□□□ -0.25
ITGB4-206ENST00000579662 DNPH1O43598 174 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 ZNF17P17021 662 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 RAB7AP51149 207 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 OR6S1Q8NH40 331 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 ALX3O95076 343 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 RPL11P62913 178 aaKnown RBP13.51□□□□□ -0.25
ITGB4-206ENST00000579662 OR5D13Q8NGL4 314 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 C10orf90Q96M02 699 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 CXXC4Q9H2H0 198 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 CLEC18AA5D8T8 446 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 CCL4P13236 92 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 KLF3P57682 345 aaPredicted RBP13.51□□□□□ -0.25
ITGB4-206ENST00000579662 CLEC18CQ8NCF0 446 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 ADAM19Q9H013 955 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 SLC26A1Q9H2B4 701 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 TMED3Q9Y3Q3 217 aa13.51□□□□□ -0.25
ITGB4-206ENST00000579662 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
ITGB4-206ENST00000579662 RFPL4AA6NLU0 287 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 B4E171 279 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 RFPL4AL1F8VTS6 287 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 OGG1O15527 345 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 PDCD6O75340 191 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 TSPAN7P41732 249 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 KIR2DS2P43631 304 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 PMS2CLQ68D20 193 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 RPUSD3Q6P087 351 aaKnown RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 LHX4Q969G2 390 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 MRM2Q9UI43 246 aaKnown RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 SPINK14Q6IE38 97 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 BAGE3Q86Y29 109 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 BAGE2Q86Y30 109 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 OSGIN2Q9Y236 505 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 IGHA1P01876 353 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 GLCCI1Q86VQ1 547 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 ZFP62Q8NB50 900 aaPredicted RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 OR52B4Q8NGK2 314 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 TM4SF19Q96DZ7 209 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 NRTNQ99748 197 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 PATZ1Q9HBE1 687 aaKnown RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 RAB18Q9NP72 206 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 OIP5O43482 229 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 ZNF816Q0VGE8 651 aaPredicted RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 ZNF331Q9NQX6 463 aaPredicted RBP13.5□□□□□ -0.25
ITGB4-206ENST00000579662 FFAR1O14842 300 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 OR5G3P0C626 314 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 SLC16A12Q6ZSM3 486 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 VASH2Q86V25 355 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 GINS3Q9BRX5 216 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 CES1P1Q9UKY3 287 aa13.5□□□□□ -0.25
ITGB4-206ENST00000579662 UMAD1C9J7I0 102 aa13.49□□□□□ -0.25
ITGB4-206ENST00000579662 PGA3P0DJD8 388 aa13.49□□□□□ -0.25
ITGB4-206ENST00000579662 TIGITQ495A1 244 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms