RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ODF4Q2M2E3 257 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 CEACAM21Q3KPI0 293 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 FAM76BQ5HYJ3 339 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 CEP78Q5JTW2 689 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
VAPA-204ENST00000577901 ZNF691Q5VV52 312 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 MOB3CQ70IA8 216 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 EGFL6Q8IUX8 553 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 GCSAMQ8N6F7 178 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 C19orf18Q8NEA5 215 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 OR5A2Q8NGI9 324 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 OR14K1Q8NGZ2 314 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 LRRC29Q8WV35 223 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 TAF15Q92804 592 aaKnown RBP eCLIP13.32□□□□□ -0.28
VAPA-204ENST00000577901 SSBP3Q9BWW4 388 aaPredicted RBP13.32□□□□□ -0.28
VAPA-204ENST00000577901 TLNRD1Q9H1K6 362 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 INPP5EQ9NRR6 644 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 ACOXLQ9NUZ1 547 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 MRPS18AQ9NVS2 196 aaKnown RBP13.32□□□□□ -0.28
VAPA-204ENST00000577901 V9GYS6 101 aa13.32□□□□□ -0.28
VAPA-204ENST00000577901 IGHV3OR16-10A0A075B7F0 116 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 OR5B21A6NL26 309 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 ZNF732B4DXR9 585 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 J3QLW9 94 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 SYT7O43581 403 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 IGHV4-38-2P0DP08 117 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 ZNF19P17023 458 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 CFHR2P36980 270 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 PSMB10P40306 273 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 OR12D2P58182 307 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 CSNK2BP67870 215 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 SLC34A1Q06495 639 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 IL18R1Q13478 541 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 GALEQ14376 348 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 PLCXD3Q63HM9 321 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 WDR82Q6UXN9 313 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 Q6ZSR3 168 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 LHFPL3Q86UP9 236 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 APH1BQ8WW43 257 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 HPSE2Q8WWQ2 592 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 ALG8Q9BVK2 526 aa13.31□□□□□ -0.28
VAPA-204ENST00000577901 SOX21Q9Y651 276 aaPredicted RBP13.31□□□□□ -0.28
VAPA-204ENST00000577901 IRGMA1A4Y4 181 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 H0YAE9 185 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 CLIC3O95833 236 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 IGHA1P01876 353 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 HTR1AP08908 422 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 UBCP0CG48 685 aaKnown RBP13.3□□□□□ -0.28
VAPA-204ENST00000577901 PPIAL4GP0DN37 164 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 MUC1P15941 1255 aaPredicted RBP13.3□□□□□ -0.28
VAPA-204ENST00000577901 CCL1P22362 96 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 GPM6AP51674 278 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 ADARB1P78563 741 aaKnown RBP13.3□□□□□ -0.28
VAPA-204ENST00000577901 MICBQ29980 383 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 TMEM244Q5VVB8 128 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 TEX36Q5VZQ5 186 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 BTNL3Q6UXE8 466 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 C9orf139Q6ZV77 190 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 PRSS35Q8N3Z0 413 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 SCCPDHQ8NBX0 429 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 OR52I1Q8NGK6 324 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 OR2G2Q8NGZ5 317 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 RPL3LQ92901 407 aaKnown RBP13.3□□□□□ -0.28
VAPA-204ENST00000577901 C4orf36Q96KX1 117 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 SLITRK2Q9H156 845 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 PLEKHA1Q9HB21 404 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 ERVK-18Q9QC07 812 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 CLN8Q9UBY8 286 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 MYRFQ9Y2G1 1151 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 HSPE1-MOB4S4R3N1 261 aa13.3□□□□□ -0.28
VAPA-204ENST00000577901 TGP01266 2768 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 WBP4O75554 376 aaKnown RBP13.29□□□□□ -0.28
VAPA-204ENST00000577901 MDKP21741 143 aaPredicted RBP13.29□□□□□ -0.28
VAPA-204ENST00000577901 CAPGP40121 348 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 PITPNBP48739 271 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 NPY4RP50391 375 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 HOXA4Q00056 320 aaPredicted RBP13.29□□□□□ -0.28
VAPA-204ENST00000577901 PAX2Q02962 417 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 MRPL28Q13084 256 aaKnown RBP13.29□□□□□ -0.28
VAPA-204ENST00000577901 TMEM42Q69YG0 159 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 FDX2Q6P4F2 183 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 LYPD2Q6UXB3 125 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 SYS1Q8N2H4 156 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 ZNF671Q8TAW3 534 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 TMIGD2Q96BF3 282 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 UPRTQ96BW1 309 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 OR51I2Q9H344 312 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 ERVK13-1Q9NX77 482 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 FRRS1LQ9P0K9 344 aa13.29□□□□□ -0.28
VAPA-204ENST00000577901 A6NIN4 97 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 ADAM20O43506 726 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 PLATP00750 562 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 SERPINA3P01011 423 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 GYPAP02724 150 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 ISG15P05161 165 aa13.28□□□□□ -0.28
VAPA-204ENST00000577901 RPSAP08865 295 aaKnown RBP13.28□□□□□ -0.28
VAPA-204ENST00000577901 CCR9P51686 369 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms