RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CNN3Q15417 329 aaKnown RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 TRAM1Q15629 374 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 HFEQ30201 348 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 FAM27D1Q5T7N8 215 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 ZNF529Q6P280 563 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CLEC2AQ6UVW9 174 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TMEM91Q6ZNR0 172 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 RNF144BQ7Z419 303 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CEACAM19Q7Z692 300 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 ANGPTL5Q86XS5 388 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 SCCPDHQ8NBX0 429 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 OR51A2Q8NGJ7 313 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 C10orf105Q8TEF2 133 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 FAM168AQ92567 244 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 ERGIC1Q969X5 290 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 BORCS8Q96FH0 119 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 Q96MF0 132 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TECTBQ96PL2 329 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 DERL3Q96Q80 235 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TLNRD1Q9H1K6 362 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 PPIL3Q9H2H8 161 aaKnown RBP7.22□□□□□ -1.25
NUP88-211ENST00000575976 OR51I2Q9H344 312 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 CHODLQ9H9P2 273 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 VCX3AQ9NNX9 186 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 C1orf123Q9NWV4 160 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 NDUFB11Q9NX14 153 aa7.22□□□□□ -1.25
NUP88-211ENST00000575976 TRAV8-7A0A075B6U6 113 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 hCG_1807616A0A1W2PRN6 198 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 LRP5LA4QPB2 252 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 CLDN25C9JDP6 229 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 TMEM178BH3BS89 294 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 PPIHO43447 177 aaKnown RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 SYNGR1O43759 233 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 GPX5O75715 221 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 RHBDL1O75783 438 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 RGS9O75916 674 aaPredicted RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 ALX3O95076 343 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 CSF3P09919 207 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 OCMP0CE72 109 aaPredicted RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 IRF2P14316 349 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 PRKACBP22694 351 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 PSMA1P25786 263 aaKnown RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 MAPK3P27361 379 aaPredicted RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 HAAOP46952 286 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 RBP2P50120 134 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 TMEM33P57088 247 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 DSCR9P59020 149 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 RIN1Q13671 783 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 ZNF181Q2M3W8 571 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 FAM201AQ5SY85 155 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 AVPI1Q5T686 147 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 HAGHLQ6PII5 290 aaPredicted RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 CRIP3Q6Q6R5 217 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 CD200R1LQ6Q8B3 271 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 WDR82Q6UXN9 313 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 LHFPL2Q6ZUX7 228 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 ZNF573Q86YE8 665 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 CALHM1Q8IU99 346 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 DNAAF1Q8NEP3 725 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 WFDC11Q8NEX6 87 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 OR52N4Q8NGI2 321 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 OR11L1Q8NGX0 322 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 Q8TCH9 128 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 THRSPQ92748 146 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 RFT1Q96AA3 541 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 SPSB1Q96BD6 273 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 SPACA5Q96QH8 159 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 MRPS26Q9BYN8 205 aaKnown RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 BPESC1Q9GZL8 116 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 METTL17Q9H7H0 456 aaPredicted RBP7.21□□□□□ -1.26
NUP88-211ENST00000575976 RNF7Q9UBF6 113 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 FOXJ3Q9UPW0 622 aa7.21□□□□□ -1.26
NUP88-211ENST00000575976 TRDV1A0A1B0GX56 115 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TRIM64BA6NI03 449 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 LRRC30A6NM36 301 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 VWC2LB2RUY7 222 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 C3orf80F5H4A9 247 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 J3QT63 122 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 IFNL4K9M1U5 179 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 NDUFS8O00217 210 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 ZNF205O95201 554 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 PLATP00750 562 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 LHBP01229 141 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 MAS1P04201 325 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 ALDOBP05062 364 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 TFAP2AP05549 437 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 HCKP08631 526 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 UCHL1P09936 223 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 CD36P16671 472 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 EGR1P18146 543 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 FSTP19883 344 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 GIFP27352 417 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 BDKRB2P30411 391 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 CD80P33681 288 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 NR4A2P43354 598 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 GPR6P46095 362 aaPredicted RBP7.2□□□□□ -1.26
NUP88-211ENST00000575976 ATP1B3P54709 279 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 MTCP1P56278 107 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 PPP3R1P63098 170 aa7.2□□□□□ -1.26
NUP88-211ENST00000575976 HSD17B12Q53GQ0 312 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms