RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 RBP2P50120 134 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 MTCP1P56278 107 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF181Q2M3W8 571 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 AVPI1Q5T686 147 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 LHFPL2Q6ZUX7 228 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 KRTAP1-3Q8IUG1 177 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 DNAAF1Q8NEP3 725 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 Q8TCH9 128 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 LRRC29Q8WV35 223 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 ORAI1Q96D31 301 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 DERL3Q96Q80 235 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 FGF23Q9GZV9 251 aaPredicted RBP12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 OR51I2Q9H344 312 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 NOX4Q9NPH5 578 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 DCAF16Q9NXF7 216 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 NPTNQ9Y639 398 aa12.24□□□□□ -0.45
NPLOC4-218ENST00000574964 MED13LQ71F56 2210 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 IGKV1-9A0A0C4DH69 117 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 MAGEA13PA6NCF6 341 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM178BH3BS89 294 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 RGS9O75916 674 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 ALX3O95076 343 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 CYB5AP00167 134 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 PLATP00750 562 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 NR4A2P43354 598 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 POU3F4P49335 361 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 RIN1Q13671 783 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 SSX1Q16384 188 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 SYT6Q5T7P8 510 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 DNM1P46Q6ZS02 220 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 SATL1Q86VE3 508 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 C11orf53Q8IXP5 236 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 CPNE2Q96FN4 548 aaPredicted RBP12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 GPER1Q99527 375 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 TCF7L1Q9HCS4 588 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 POLDIP2Q9Y2S7 368 aa12.23□□□□□ -0.45
NPLOC4-218ENST00000574964 PPIAL4EA0A075B759 164 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 TRBV5-7A0A0A0MS05 114 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 TRIM64BA6NI03 449 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 PPIAL4DF5H284 164 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 J3QT63 122 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 ZNF205O95201 554 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 PPIAL4FP0DN26 164 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 BDKRB2P30411 391 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 GMFBP60983 142 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 HNRNPA0Q13151 305 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 INSL4Q14641 139 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 HSD17B12Q53GQ0 312 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 WDR82Q6UXN9 313 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 UNQ9370/PRO34162Q6UXP9 181 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 ANGPTL5Q86XS5 388 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 OR51A2Q8NGJ7 313 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 OR10Z1Q8NGY1 313 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 MUL1Q969V5 352 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 RFT1Q96AA3 541 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 REG4Q9BYZ8 158 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 SLITRK2Q9H156 845 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 TLNRD1Q9H1K6 362 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 NARFLQ9H6Q4 476 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 METTL17Q9H7H0 456 aaPredicted RBP12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 EXOSC4Q9NPD3 245 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 NDUFB11Q9NX14 153 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 FOXJ3Q9UPW0 622 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 SF3B6Q9Y3B4 125 aaKnown RBP12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 WIPI2Q9Y4P8 454 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 PPIAL4AQ9Y536 164 aa12.22□□□□□ -0.45
NPLOC4-218ENST00000574964 GABRPO00591 440 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 ARL6IP5O75915 188 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 MAS1P04201 325 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 FSTP19883 344 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 GLRA1P23415 457 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 CD80P33681 288 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 RBMXP38159 391 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 BTG1P62324 171 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 FABP5Q01469 135 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 FAM201AQ5SY85 155 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 DDI2Q5TDH0 399 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 MKXQ8IYA7 352 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 DEFB108BQ8NET1 73 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 AQP3Q92482 292 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 PHYHIPQ92561 330 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 GAL3ST1Q99999 423 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 MRPS26Q9BYN8 205 aaKnown RBP12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 PKIBQ9C010 78 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
NPLOC4-218ENST00000574964 WNK2Q9Y3S1 2297 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 TRAV8-7A0A075B6U6 113 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 MEGF11A6BM72 1044 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 VWC2LB2RUY7 222 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 C3orf80F5H4A9 247 aa12.2□□□□□ -0.46
NPLOC4-218ENST00000574964 LGALS8O00214 317 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms