RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 RTL8AQ9BWD3 113 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 SLC22A4Q9H015 551 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 ROS1P08922 2347 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 IGHV3-64DA0A0J9YX35 117 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 A0A1B0GWJ7 208 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 OR5B21A6NL26 309 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 F5H5P2 479 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 UPK1BO75841 260 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 RGS21Q2M5E4 152 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 WDR86Q86TI4 376 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 PNLDC1Q8NA58 520 aaKnown RBP20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 OR51D1Q8NGF3 324 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 TNFAIP8L1Q8WVP5 186 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 CPNE2Q96FN4 548 aaPredicted RBP20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 SPOCK3Q9BQ16 436 aa20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 MRPS28Q9Y2Q9 187 aaKnown RBP20.46■□□□□ 0.87
ATPAF1-213ENST00000574428 HRNRQ86YZ3 2850 aaPredicted RBP20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 A0A1W2PPR1 153 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 NAT2P11245 290 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 POU3F4P49335 361 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 GNG3P63215 75 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 AWAT2Q6E213 333 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 CALHM1Q8IU99 346 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 OR5H6Q8NGV6 325 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 ACOT12Q8WYK0 555 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 OR5V1Q9UGF6 321 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 V9GYH0 126 aa20.45■□□□□ 0.86
ATPAF1-213ENST00000574428 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 SPRY3O43610 288 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 PTGFRP43088 359 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 HAAOP46952 286 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF81P51508 661 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 ZP1P60852 638 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 RIN1Q13671 783 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 C1QL2Q7Z5L3 287 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 FAM3DQ96BQ1 224 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 ABRACLQ9P1F3 81 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 NOP16Q9Y3C1 178 aaKnown RBP20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 SPRY1O43609 319 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 EVX1P49640 407 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 MZT2AQ6P582 158 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 GLIPR1L1Q6UWM5 242 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 Q6ZNX1 250 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 CHPT1Q8WUD6 406 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 ELMOD3Q96FG2 381 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 SDHCQ99643 169 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 ABCB10Q9NRK6 738 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 CYSLTR2Q9NS75 346 aa20.44■□□□□ 0.86
ATPAF1-213ENST00000574428 LOC100289279A0A1B0GTE1 492 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 ANGPTL7O43827 346 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 HPGDSO60760 199 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 TMEM225BP0DP42 221 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 CALCBP10092 127 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 ARSBP15848 533 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 EFNB3Q15768 340 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 MST1LQ2TV78 715 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 C2orf76Q3KRA6 126 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 SAMD12Q8N8I0 201 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 CXXC4Q9H2H0 198 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 NKIRAS2Q9NYR9 191 aa20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 SPTAN1Q13813 2472 aaKnown RBP20.43■□□□□ 0.86
ATPAF1-213ENST00000574428 PLA2G7Q13093 441 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 MAB21L1Q13394 359 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF181Q2M3W8 571 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 DCDC5Q6ZRR9 648 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 CENPSQ8N2Z9 138 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 MUC15Q8N387 334 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF611Q8N823 705 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 FBXW5Q969U6 566 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 OR51I2Q9H344 312 aa20.42■□□□□ 0.86
ATPAF1-213ENST00000574428 hCG_2014768A0A024R1R8 64 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 M0R233 179 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 TMEM127O75204 238 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 GRPP07492 148 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 PDZK1IP1Q13113 114 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 OR10K2Q6IF99 312 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 HAGHLQ6PII5 290 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 SLC25A26Q70HW3 274 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 LYSMD2Q8IV50 215 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 FBXL14Q8N1E6 418 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 SPERTQ8NA61 448 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 C1orf147Q96MC9 270 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 SPATA2Q9UM82 520 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ING4Q9UNL4 249 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ICE1Q9Y2F5 2266 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 B9A039 149 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 BPNT1O95861 308 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 IGHV1-46P01743 117 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF154Q13106 437 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF79Q15937 498 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 PRAMEF6Q5VXH4 476 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ZNF573Q86YE8 665 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ZCCHC24Q8N2G6 241 aaKnown RBP20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ELL3Q9HB65 397 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 C14orf119Q9NWQ9 140 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 ABCA4P78363 2273 aa20.41■□□□□ 0.86
ATPAF1-213ENST00000574428 TMEM272A0A1B0GTI8 110 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 LRP5LA4QPB2 252 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 HS3ST1O14792 307 aa20.4■□□□□ 0.86
ATPAF1-213ENST00000574428 SPRNQ5BIV9 151 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms