RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 DUSP21Q9H596 190 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 PATZ1Q9HBE1 687 aaKnown RBP10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 DNAJB11Q9UBS4 358 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 MALRD1Q5VYJ5 2156 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 HIVEP2P31629 2446 aa10.72□□□□□ -0.69
TRAPPC1-206ENST00000573989 TEP1Q99973 2627 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 FAM230AA0A1W2PPH8 454 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 PQLC2LA1A4F0 135 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 OOEPA6NGQ2 149 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 A8MV72 311 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 SRRM5B3KS81 715 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF205O95201 554 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 LHBP01229 141 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 RPS2P15880 293 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 IL2RGP31785 369 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 RBP2P50120 134 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ATP1B3P54709 279 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 MED22Q15528 200 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 UBE2V2Q15819 145 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ESCO2Q56NI9 601 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 YIF1BQ5BJH7 314 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 DMKNQ6E0U4 476 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 SFRP4Q6FHJ7 346 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 HAGHLQ6PII5 290 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 LHFPL2Q6ZUX7 228 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 C11orf53Q8IXP5 236 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 GCSAMQ8N6F7 178 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF485Q8NCK3 441 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 DNAAF1Q8NEP3 725 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR8B3Q8NGG8 313 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR51A4Q8NGJ6 313 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 TRMT10AQ8TBZ6 339 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 RPS4Y2Q8TD47 263 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 THRSPQ92748 146 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 SPSB1Q96BD6 273 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 MSI2Q96DH6 328 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ADAT3Q96EY9 351 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 CPNE2Q96FN4 548 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR8B2Q96RD0 313 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 TMEM246Q9BRR3 403 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 YTHDF1Q9BYJ9 559 aaKnown RBP10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZCCHC4Q9H5U6 513 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 YAE1D1Q9NRH1 226 aa10.71□□□□□ -0.69
TRAPPC1-206ENST00000573989 CEACAM18A8MTB9 384 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 C3orf80F5H4A9 247 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 J3QT63 122 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 MAGEB3O15480 346 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 PLPP2O43688 288 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 LMX1BO60663 402 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 FOXH1O75593 365 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 CYB5AP00167 134 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 CD1AP06126 327 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 ZNF16P17020 682 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 ATF1P18846 271 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 CELP19835 753 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 GLRA1P23415 457 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 GABARAPL2P60520 117 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 ACSM1Q08AH1 577 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 SPHARQ15513 63 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 DMRTC1Q5HYR2 192 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 FAM201AQ5SY85 155 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 TEX36Q5VZQ5 186 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 XAF1Q6GPH4 301 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 GLCCI1Q86VQ1 547 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 PARP16Q8N5Y8 322 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR10AC1Q8NH08 325 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 NPRL2Q8WTW4 380 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 AQP3Q92482 292 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 GHSRQ92847 366 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 C12orf43Q96C57 262 aaKnown RBP10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 NEIL1Q96FI4 390 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 PKIBQ9C010 78 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 PAK1IP1Q9NWT1 392 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 RASL12Q9NYN1 266 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 LRCH1Q9Y2L9 728 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 ZANQ9Y493 2812 aa10.7□□□□□ -0.7
TRAPPC1-206ENST00000573989 TRAV20A0A0B4J274 112 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 FAM157AC9JC47 383 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 AKR7A2O43488 359 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 ALX3O95076 343 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 LALBAP00709 142 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 MT-ND2P03891 347 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 MSMBP08118 114 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 RAB3AP20336 220 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 CD80P33681 288 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 NPY4RP50391 375 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 DVL1P1P54792 670 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 MTCP1P56278 107 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 KRTAP1-1Q07627 177 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 GPR50Q13585 617 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 SMIM21Q3B7S5 101 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 Q499Y3 187 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 Q71RC1 249 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 SLC36A1Q7Z2H8 476 aa10.69□□□□□ -0.7
TRAPPC1-206ENST00000573989 OR13C9Q8NGT0 318 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms