RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CDK5R1Q15078 307 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 ZMYND11Q15326 602 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 CNN3Q15417 329 aaKnown RBP9.26□□□□□ -0.93
CHD3-216ENST00000573936 UTS2BQ765I0 119 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 C11orf53Q8IXP5 236 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 NANOGP1Q8N7R0 232 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 FGGYQ96C11 551 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 MND1Q9BWT6 205 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 CDCA4Q9BXL8 241 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 CHST5Q9GZS9 411 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 TMEM165Q9HC07 324 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 YAE1D1Q9NRH1 226 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 GPR173Q9NS66 373 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 DCAF16Q9NXF7 216 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 MIOXQ9UGB7 285 aa9.26□□□□□ -0.93
CHD3-216ENST00000573936 A6NIN4 97 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 H3BSH0 61 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 WNT9BO14905 357 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 TGFAP01135 160 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 LHBP01229 141 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 CD1AP06126 327 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 MUC1P15941 1255 aaPredicted RBP9.25□□□□□ -0.93
CHD3-216ENST00000573936 PRKACBP22694 351 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 IL2RGP31785 369 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 GTF2A1P52655 376 aaPredicted RBP9.25□□□□□ -0.93
CHD3-216ENST00000573936 BDH1Q02338 343 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 IRF3Q14653 427 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 ZNF404Q494X3 552 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 FAM166AQ6J272 317 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 ZNF773Q6PK81 442 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 WDR82Q6UXN9 313 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 ZNF826PQ6ZT77 177 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 PRSS48Q7RTY5 328 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 WDR86Q86TI4 376 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 SERPINA12Q8IW75 414 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 GCSAMQ8N6F7 178 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 SCCPDHQ8NBX0 429 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 ZNF485Q8NCK3 441 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 DNAAF1Q8NEP3 725 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 OR5D14Q8NGL3 314 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 RPS4Y2Q8TD47 263 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 GPR148Q8TDV2 347 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 LRRC29Q8WV35 223 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 RPL3LQ92901 407 aaKnown RBP9.25□□□□□ -0.93
CHD3-216ENST00000573936 MSI2Q96DH6 328 aaKnown RBP9.25□□□□□ -0.93
CHD3-216ENST00000573936 SMIM19Q96E16 107 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 OR51I2Q9H344 312 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 PATZ1Q9HBE1 687 aaKnown RBP9.25□□□□□ -0.93
CHD3-216ENST00000573936 KCNS2Q9ULS6 477 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 DHDHQ9UQ10 334 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 POLDIP2Q9Y2S7 368 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 ZNF281Q9Y2X9 895 aa9.25□□□□□ -0.93
CHD3-216ENST00000573936 TANC2Q9HCD6 1990 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 DYSFO75923 2080 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 FAM230AA0A1W2PPH8 454 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 PQLC2LA1A4F0 135 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OOEPA6NGQ2 149 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 A8MV72 311 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 SRRM5B3KS81 715 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 FOXH1O75593 365 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 CD2P06729 351 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OCM2P0CE71 109 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OCMP0CE72 109 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 SMIM18P0DKX4 95 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 ATF1P18846 271 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 PCMT1P22061 227 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 HAAOP46952 286 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 ATP1B3P54709 279 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 DVL1P1P54792 670 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 ACSM1Q08AH1 577 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 UBE2V2Q15819 145 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 MICBQ29980 383 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 CHRFAM7AQ494W8 412 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 YIF1BQ5BJH7 314 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 TEX36Q5VZQ5 186 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 DMKNQ6E0U4 476 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 DCDC5Q6ZRR9 648 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 NLRC3Q7RTR2 1065 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 TSPAN14Q8NG11 270 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OR8B3Q8NGG8 313 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OR51A4Q8NGJ6 313 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OR51F2Q8NH61 342 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 TSEN15Q8WW01 171 aaKnown RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 ADAT3Q96EY9 351 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 BORCS8Q96FH0 119 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 OR8B2Q96RD0 313 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 TMEM246Q9BRR3 403 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 CCDC90BQ9GZT6 254 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 FGF23Q9GZV9 251 aaPredicted RBP9.24□□□□□ -0.93
CHD3-216ENST00000573936 ZCCHC4Q9H5U6 513 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 TMEM160Q9NX00 188 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 RASL12Q9NYN1 266 aa9.24□□□□□ -0.93
CHD3-216ENST00000573936 TRAV20A0A0B4J274 112 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 MAGEA13PA6NCF6 341 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 CEACAM18A8MTB9 384 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 FAM157AC9JC47 383 aa9.23□□□□□ -0.93
CHD3-216ENST00000573936 F5H0A9 414 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms