RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 COLCA2A8K830 154 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 DHRS3O75911 302 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 ZFAND5O76080 213 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 TMEM33P57088 247 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 SLC16A14Q7RTX9 510 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 RABEPKQ7Z6M1 372 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 PIGTQ969N2 578 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 KIRREL1Q96J84 757 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 TM2D1Q9BX74 207 aa13.71□□□□□ -0.21
NUP88-207ENST00000573584 AQP7P3A6NL99 342 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 DEDDO75618 318 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 TIAF1O95411 115 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 IFNA21P01568 189 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 ZNF84P51523 738 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 DVL1P1P54792 670 aaPredicted RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 LCN10Q6JVE6 187 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 ABCA7Q8IZY2 2146 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 AKR1E2Q96JD6 320 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 PRRX2Q99811 253 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 PIGLQ9Y2B2 252 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 LSM5Q9Y4Y9 91 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 EXPH5Q8NEV8 1989 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 MED12Q93074 2177 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 WDR87Q6ZQQ6 2873 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 CFAP54Q96N23 3096 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 IGLV3-1P01715 115 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 OR8U9P0C7N5 309 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 ECI1P42126 302 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 LSM6P62312 80 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 EIF3IQ13347 325 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 SWI5Q1ZZU3 235 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 DTX1Q86Y01 620 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 GJC3Q8NFK1 279 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 OR8U1Q8NH10 309 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 PP6455Q8WZ26 134 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 HAS2Q92819 552 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 HDHD3Q9BSH5 251 aaPredicted RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 SMCO4Q9NRQ5 59 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 RTTNQ86VV8 2226 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 OR5H15A6NDH6 313 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 GAPDHP04406 335 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 MSR1P21757 451 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 MEOX2P50222 304 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 LBX1P52954 281 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 PPA1Q15181 289 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 GGNBP1Q5YKI7 109 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 SFT2D1Q8WV19 159 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 CHST5Q9GZS9 411 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 PARP12Q9H0J9 701 aaKnown RBP13.7□□□□□ -0.22
NUP88-207ENST00000573584 TUBD1Q9UJT1 453 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
NUP88-207ENST00000573584 A0A0U1RQV5 110 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 SCGB1D2O95969 90 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 CTSDP07339 412 aaPredicted RBP13.69□□□□□ -0.22
NUP88-207ENST00000573584 ETV3LQ6ZN32 361 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 LRRC18Q8N456 261 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 WDSUB1Q8N9V3 476 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 SLC25A43Q8WUT9 341 aaPredicted RBP13.69□□□□□ -0.22
NUP88-207ENST00000573584 OR6C1Q96RD1 312 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 USB1Q9BQ65 265 aaKnown RBP13.69□□□□□ -0.22
NUP88-207ENST00000573584 IFT22Q9H7X7 185 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 ATPIF1Q9UII2 106 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 PADI1Q9ULC6 663 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 B3GALT1Q9Y5Z6 326 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 POMT1Q9Y6A1 747 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 V9GYS6 101 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 FAM157AC9JC47 383 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 CA11O75493 328 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 SLC35A1P78382 337 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 RSPO4Q2I0M5 234 aaPredicted RBP13.69□□□□□ -0.22
NUP88-207ENST00000573584 OPN5Q6U736 354 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 OR9K2Q8NGE7 335 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 AMDHD2Q9Y303 409 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 CABIN1Q9Y6J0 2220 aa13.69□□□□□ -0.22
NUP88-207ENST00000573584 LOC102725191A0A1B0GVB3 256 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 CRYM-AS1A6NIL9 109 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 CSNK1A1P48729 337 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 FAM3AP98173 230 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 RPUSD3Q6P087 351 aaKnown RBP13.68□□□□□ -0.22
NUP88-207ENST00000573584 SLC22A8Q8TCC7 542 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 SECTM1Q8WVN6 248 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 PIGQQ9BRB3 760 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 CHRDQ9H2X0 955 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 NELFAQ9H3P2 528 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 CACFD1Q9UGQ2 172 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 RRP8O43159 456 aaKnown RBP13.68□□□□□ -0.22
NUP88-207ENST00000573584 SCRG1O75711 98 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 IFNA4P05014 189 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 OR5H8P0DN80 308 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 TMEM225BP0DP42 221 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 EIF1P41567 113 aaKnown RBP13.68□□□□□ -0.22
NUP88-207ENST00000573584 AKR1C3P42330 323 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 PPT1P50897 306 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 B2MP61769 119 aa13.68□□□□□ -0.22
NUP88-207ENST00000573584 ZNF239Q16600 458 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms