RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CLDND2Q8NHS1 167 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ZFP90Q8TF47 636 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 DYRK2Q92630 601 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 OSTF1Q92882 214 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CREB3L1Q96BA8 519 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LGALS12Q96DT0 336 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 RBMXL1Q96E39 390 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 CCDC126Q96EE4 140 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 DNAJA3Q96EY1 480 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 C12orf57Q99622 126 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF251Q9BRH9 671 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SUCNR1Q9BXA5 334 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 NT5DC2Q9H857 520 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SDF2L1Q9HCN8 221 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LYRM4Q9HD34 91 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SLC52A3Q9NQ40 469 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 UFSP2Q9NUQ7 469 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LYARQ9NX58 379 aaKnown RBP4.41□□□□□ -1.7
SF3B3-214ENST00000572365 TMEM181Q9P2C4 612 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ZNF639Q9UID6 485 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 ABCG2Q9UNQ0 655 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 LRP12Q9Y561 859 aa4.41□□□□□ -1.7
SF3B3-214ENST00000572365 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.7
SF3B3-214ENST00000572365 DYNC2H1Q8NCM8 4307 aaKnown RBP4.4□□□□□ -1.7
SF3B3-214ENST00000572365 TET2Q6N021 2002 aaPredicted RBP4.4□□□□□ -1.7
SF3B3-214ENST00000572365 TRAV18A0A075B6X5 111 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 A0A1B0GVI7 797 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MSGN1A6NI15 193 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 OR6C70A6NIJ9 312 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PMS2P5A8MQ11 134 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 B4DSR2 109 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 UBXN8O00124 270 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 NDUFS8O00217 210 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SCAMP2O15127 329 aaKnown RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ORC5O43913 435 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PLIN3O60664 434 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PIAS1O75925 651 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 KCNK2O95069 426 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 C8GP07360 202 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 UROSP10746 265 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 THRBP10828 461 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MLNP12872 115 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF10P21506 573 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 HIST1H1TP22492 207 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 IGHV1-2P23083 117 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SSR2P43308 183 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 RFX3P48380 749 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MEOX2P50222 304 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ARHGDIAP52565 204 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 DSCR4P56555 118 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 GPX6P59796 221 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 TNFRSF17Q02223 184 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PUDPQ08623 228 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 CD300CQ08708 224 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ASAH1Q13510 395 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 CEACAM7Q14002 265 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 LTB4RQ15722 352 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MAPK11Q15759 364 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MICAQ29983 383 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 RNF212Q495C1 297 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 CDNFQ49AH0 187 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 TRMT12Q53H54 448 aaKnown RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 CYBRD1Q53TN4 286 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 FAM219BQ5XKK7 198 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 XAF1Q6GPH4 301 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 OR4C11Q6IEV9 310 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PYHIN1Q6K0P9 492 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PLET1Q6UQ28 207 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 KCTD9Q7L273 389 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PRSS35Q8N3Z0 413 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 CBR4Q8N4T8 237 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 OR1M1Q8NGA1 313 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 OR8H1Q8NGG4 311 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 OR52N1Q8NH53 320 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 RBPMSQ93062 196 aaKnown RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SLC38A4Q969I6 547 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 LRRC58Q96CX6 371 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 COL21A1Q96P44 957 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 TSSK2Q96PF2 358 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PPP1R2P1Q96PQ5 205 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SLC30A2Q9BRI3 323 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SRXN1Q9BYN0 137 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 PIGUQ9H490 435 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ABCD2Q9UBJ2 740 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 SEC14L4Q9UDX3 406 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MLXQ9UH92 298 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 ELF5Q9UKW6 265 aaPredicted RBP4.4□□□□□ -1.71
SF3B3-214ENST00000572365 TCF19Q9Y242 345 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 TEX264Q9Y6I9 313 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 RYR1P21817 5038 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 HYDINQ4G0P3 5121 aa4.4□□□□□ -1.71
SF3B3-214ENST00000572365 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 TCRBV9S1A1TA0A576 114 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 CIB4A0PJX0 185 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 METTL15A6NJ78 407 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 MPTX1A8MV57 137 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
SF3B3-214ENST00000572365 EFCAB9A8MZ26 197 aa4.39□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF432O94892 652 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms