RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 FAM216BQ8N7L0 139 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 PNLDC1Q8NA58 520 aaKnown RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 RHOXF1Q8NHV9 184 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 AQP3Q92482 292 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 Q96MT0 163 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 ADI1Q9BV57 179 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 MS4A7Q9GZW8 240 aaPredicted RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 DUX4Q9UBX2 424 aa16.7■□□□□ 0.26
NUP88-204ENST00000572290 EXOGQ9Y2C4 368 aaKnown RBP16.7■□□□□ 0.26
NUP88-204ENST00000572290 IGHV3OR16-10A0A075B7F0 116 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 TRAV40A0A0B4J280 105 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 A6NIN4 97 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 NKX6-3A6NJ46 265 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 NDUFB3O43676 98 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 AMY2BP19961 511 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 ZNF91Q05481 1191 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 CDONQ4KMG0 1287 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 RBMS3Q6XE24 437 aaKnown RBP16.69■□□□□ 0.26
NUP88-204ENST00000572290 PRSS35Q8N3Z0 413 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 ACBD7Q8N6N7 88 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 CCDC54Q8NEL0 328 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 LGALS12Q96DT0 336 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 RDH12Q96NR8 316 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 DNTTIP1Q9H147 329 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 PLEKHA1Q9HB21 404 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 NLKQ9UBE8 527 aa16.69■□□□□ 0.26
NUP88-204ENST00000572290 ZNF879B4DU55 563 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 H3BSH0 61 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 TRIM77I1YAP6 450 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 SLC16A6O15403 523 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 UBCP0CG48 685 aaKnown RBP16.68■□□□□ 0.26
NUP88-204ENST00000572290 DBTP11182 482 aaKnown RBP16.68■□□□□ 0.26
NUP88-204ENST00000572290 TGM4P49221 684 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 IKZF1Q13422 519 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 ZNF788Q6ZQV5 615 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 ZNF573Q86YE8 665 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 BCL6BQ8N143 479 aaPredicted RBP16.68■□□□□ 0.26
NUP88-204ENST00000572290 FGFRL1Q8N441 504 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 SIGLECL1Q8N7X8 197 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.68■□□□□ 0.26
NUP88-204ENST00000572290 ANGPTL6Q8NI99 470 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 TMIGD2Q96BF3 282 aa16.68■□□□□ 0.26
NUP88-204ENST00000572290 SMPD3Q9NY59 655 aaPredicted RBP16.68■□□□□ 0.26
NUP88-204ENST00000572290 PQLC2LA1A4F0 135 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 ANKRD61A6NGH8 418 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 OR2AT4A6NND4 320 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 J3QT63 122 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 GPR37O15354 613 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 PLATP00750 562 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 KIR3DL2P43630 455 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 HAAOP46952 286 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 OR12D2P58182 307 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 TUSC1Q2TAM9 212 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 LRRC10Q5BKY1 277 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 ZNF555Q8NEP9 628 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 OR2G2Q8NGZ5 317 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 RNF166Q96A37 237 aaPredicted RBP16.67■□□□□ 0.26
NUP88-204ENST00000572290 MRPL48Q96GC5 212 aaKnown RBP16.67■□□□□ 0.26
NUP88-204ENST00000572290 MED30Q96HR3 178 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 GAFA1Q96PS6 74 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 PCGF1Q9BSM1 259 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 AMBNQ9NP70 447 aa16.67■□□□□ 0.26
NUP88-204ENST00000572290 RPUSD1Q9UJJ7 312 aaKnown RBP16.67■□□□□ 0.26
NUP88-204ENST00000572290 LOC107986453A0A1B0GWG9 222 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 J3QLW9 94 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 TOX4O94842 621 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 TFF1P04155 84 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ZNF19P17023 458 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ACTA2P62736 377 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ACTG2P63267 376 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 IL13RA1P78552 427 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 GPR157Q5UAW9 335 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 TMEM244Q5VVB8 128 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 METTL11BQ5VVY1 283 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 C9orf139Q6ZV77 190 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 RDH10Q8IZV5 341 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ZDHHC22Q8N966 263 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 POC1AQ8NBT0 407 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 WDFY2Q96P53 400 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 MYCBPQ99417 103 aaPredicted RBP16.66■□□□□ 0.26
NUP88-204ENST00000572290 CNTD2Q9H8S5 307 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ESM1Q9NQ30 184 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 RASL12Q9NYN1 266 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 SLC7A11Q9UPY5 501 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 POLDIP2Q9Y2S7 368 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 ARHGAP32A7KAX9 2087 aa16.66■□□□□ 0.26
NUP88-204ENST00000572290 SIGLEC5O15389 551 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 SYNGR1O43759 233 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 GATBO75879 557 aaKnown RBP16.65■□□□□ 0.26
NUP88-204ENST00000572290 FADS2O95864 444 aaKnown RBP16.65■□□□□ 0.26
NUP88-204ENST00000572290 SERPINA3P01011 423 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 SFTPBP07988 381 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 HTR1AP08908 422 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 ACAA1P09110 424 aaPredicted RBP16.65■□□□□ 0.26
NUP88-204ENST00000572290 PSG2P11465 335 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 SELLP14151 372 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 MMP9P14780 707 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 GABRA2P47869 451 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 ARF6P62330 175 aa16.65■□□□□ 0.26
NUP88-204ENST00000572290 DGUOKQ16854 277 aa16.65■□□□□ 0.26
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