RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 PCDHGB1Q9Y5G3 927 aa11.14□□□□□ -0.63
RPAIN-207ENST00000570883 AUP1Q9Y679 476 aa11.14□□□□□ -0.63
RPAIN-207ENST00000570883 PQLC2LA1A4F0 135 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 J3QLW9 94 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 SYT7O43581 403 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 NDUFA2O43678 99 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 TFF1P04155 84 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 UBCP0CG48 685 aaKnown RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 SELLP14151 372 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ZNF19P17023 458 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 NPY4RP50391 375 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ACTA2P62736 377 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ACTG2P63267 376 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 RAB40BQ12829 278 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 GALEQ14376 348 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 HAGHLQ6PII5 290 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 KCTD20Q7Z5Y7 419 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 OR5T2Q8NGG2 359 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 NANPQ8TBE9 248 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 C12orf43Q96C57 262 aaKnown RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 CCL13Q99616 98 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ALG8Q9BVK2 526 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ISG20L2Q9H9L3 353 aaKnown RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 C8orf4Q9NR00 106 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 SNTG1Q9NSN8 517 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ERVK13-1Q9NX77 482 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 ERVK-18Q9QC07 812 aa11.13□□□□□ -0.63
RPAIN-207ENST00000570883 NKX1-2Q9UD57 310 aaPredicted RBP11.13□□□□□ -0.63
RPAIN-207ENST00000570883 KIR2DS1A0A191URI9 304 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 ANKRD61A6NGH8 418 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 OR4C45A6NMZ5 311 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 RNF212BA8MTL3 300 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 DVL1O14640 695 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 TMPRSS2O15393 492 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 SYNGR1O43759 233 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 FADS2O95864 444 aaKnown RBP11.12□□□□□ -0.63
RPAIN-207ENST00000570883 GNAO1P09471 354 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 LIMS3P0CW19 117 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 LIMS4P0CW20 117 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 SYS1Q8N2H4 156 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 OR10AC1Q8NH08 325 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 NPRL2Q8WTW4 380 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
RPAIN-207ENST00000570883 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 MRI1Q9BV20 369 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 PLEKHA1Q9HB21 404 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 INPP5EQ9NRR6 644 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 RPL36Q9Y3U8 105 aaKnown RBP11.12□□□□□ -0.63
RPAIN-207ENST00000570883 TENM1Q9UKZ4 2725 aa11.12□□□□□ -0.63
RPAIN-207ENST00000570883 IGKV1D-17A0A075B6S4 117 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 IGKV1-27A0A075B6S5 117 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 E9PI62 339 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 J3QT63 122 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 TCF21O43680 179 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ENSAO43768 121 aaKnown RBP11.11□□□□□ -0.63
RPAIN-207ENST00000570883 RGS9O75916 674 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ISG15P05161 165 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 HTR1AP08908 422 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 TGM4P49221 684 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 CCR9P51686 369 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 UBE2V2Q15819 145 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ARMCX4Q5H9R4 360 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ATPAF1Q5TC12 328 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-207ENST00000570883 TTC23Q5W5X9 447 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 BTNL3Q6UXE8 466 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 PHC2Q8IXK0 858 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 DHRSXQ8N5I4 330 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 POC1AQ8NBT0 407 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 OR51A4Q8NGJ6 313 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ANGPTL6Q8NI99 470 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 TRMT10AQ8TBZ6 339 aaKnown RBP11.11□□□□□ -0.63
RPAIN-207ENST00000570883 C22orf15Q8WYQ4 148 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 UPRTQ96BW1 309 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 GAFA1Q96PS6 74 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 SLC6A7Q99884 636 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ADI1Q9BV57 179 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 JAM3Q9BX67 310 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 CHST5Q9GZS9 411 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 FGF20Q9NP95 211 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-207ENST00000570883 NLKQ9UBE8 527 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 DNAJB11Q9UBS4 358 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 ZNF222Q9UK12 451 aa11.11□□□□□ -0.63
RPAIN-207ENST00000570883 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 VENTXO95231 258 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 PPIAL4GP0DN37 164 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 IGHV4-38-2P0DP08 117 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 GLRA1P23415 457 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 MPZP25189 248 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 CAPGP40121 348 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 HAAOP46952 286 aa11.1□□□□□ -0.63
RPAIN-207ENST00000570883 FGF12P61328 243 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms