RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 EXOGQ9Y2C4 368 aaKnown RBP10.8□□□□□ -0.68
CNOT1-220ENST00000569916 IGHV3OR16-10A0A075B7F0 116 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 A0A1B0GVI7 797 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 DAPL1A0PJW8 107 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 PQLC2LA1A4F0 135 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 A6NIN4 97 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 SNTNA6NMZ2 147 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF879B4DU55 563 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 H3BSH0 61 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 SLC16A6O15403 523 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 MPZL2O60487 215 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 PLATP00750 562 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 TFF1P04155 84 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 DBTP11182 482 aaKnown RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 SELLP14151 372 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 MMP9P14780 707 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 GLRA1P23415 457 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 FPR2P25090 351 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 C11orf91Q3C1V1 193 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 ATPAF1Q5TC12 328 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 HAGHLQ6PII5 290 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 BTN2A1Q7KYR7 527 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 SLC36A1Q7Z2H8 476 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 ANGPTL6Q8NI99 470 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 ZFAND2BQ8WV99 257 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 APH1BQ8WW43 257 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 ST8SIA4Q92187 359 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 RDH12Q96NR8 316 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 DNTTIP1Q9H147 329 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 SMPD3Q9NY59 655 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-220ENST00000569916 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
CNOT1-220ENST00000569916 LOC107986453A0A1B0GWG9 222 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ANKRD61A6NGH8 418 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 J3QT63 122 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 SYT7O43581 403 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ECDO95905 644 aaPredicted RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 LIPFP07098 398 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 SFTPBP07988 381 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 UBCP0CG48 685 aaKnown RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 TGM4P49221 684 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 OR12D2P58182 307 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 NANOS3P60323 173 aaKnown RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 IKZF1Q13422 519 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 FDX2Q6P4F2 183 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF788Q6ZQV5 615 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 C9orf139Q6ZV77 190 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 KCTD20Q7Z5Y7 419 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ACBD7Q8N6N7 88 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 SIGLECL1Q8N7X8 197 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ZDHHC22Q8N966 263 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 PNLDC1Q8NA58 520 aaKnown RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 OR2G2Q8NGZ5 317 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF671Q8TAW3 534 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 PELI1Q96FA3 418 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF48Q96MX3 618 aaPredicted RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 JMJD8Q96S16 334 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 TBX15Q96SF7 602 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 PLEKHA1Q9HB21 404 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 RPUSD1Q9UJJ7 312 aaKnown RBP10.78□□□□□ -0.68
CNOT1-220ENST00000569916 ZNF222Q9UK12 451 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 PCDHGB1Q9Y5G3 927 aa10.78□□□□□ -0.68
CNOT1-220ENST00000569916 IGKV1D-17A0A075B6S4 117 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 NKX6-3A6NJ46 265 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 OR2AT4A6NND4 320 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 SIGLEC5O15389 551 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 NDUFB3O43676 98 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 SYNGR1O43759 233 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 IGHA1P01876 353 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 PSG2P11465 335 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 MPZP25189 248 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 HAAOP46952 286 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 ACTA2P62736 377 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 ACTG2P63267 376 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 RCN1Q15293 331 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 UBE2V2Q15819 145 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 DGUOKQ16854 277 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 LPCAT4Q643R3 524 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF573Q86YE8 665 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 RDH10Q8IZV5 341 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 POC1AQ8NBT0 407 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 CCDC54Q8NEL0 328 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 TMIGD2Q96BF3 282 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 C4orf36Q96KX1 117 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF488Q96MN9 340 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 Q96MT0 163 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 WDFY2Q96P53 400 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 ZNF649Q9BS31 505 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 PCGF1Q9BSM1 259 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 CHST5Q9GZS9 411 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 MS4A7Q9GZW8 240 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-220ENST00000569916 AMBNQ9NP70 447 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 FRRS1LQ9P0K9 344 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 MYRFQ9Y2G1 1151 aa10.77□□□□□ -0.69
CNOT1-220ENST00000569916 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-220ENST00000569916 STAB1Q9NY15 2570 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms