RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 OR52I1Q8NGK6 324 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 C10orf35Q96D05 121 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 PELI1Q96FA3 418 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 C4orf36Q96KX1 117 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 TECTBQ96PL2 329 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 MRI1Q9BV20 369 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 PLEKHA1Q9HB21 404 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 GPR173Q9NS66 373 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 ERVK13-1Q9NX77 482 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 FRRS1LQ9P0K9 344 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 DNAJB11Q9UBS4 358 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
HERPUD1-218ENST00000569569 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 ANKRD61A6NGH8 418 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 H3BSH0 61 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 RHBDL1O75783 438 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 SERPINA3P01011 423 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 ISG15P05161 165 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 GLRA1P23415 457 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 IL18R1Q13478 541 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 C11orf91Q3C1V1 193 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 SLC36A1Q7Z2H8 476 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 ZNF573Q86YE8 665 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 RDH10Q8IZV5 341 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 AQP3Q92482 292 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 DACT3Q96B18 629 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 SEH1LQ96EE3 360 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 NUDT16L1Q9BRJ7 211 aaKnown RBP11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 ZNF649Q9BS31 505 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 WDR13Q9H1Z4 485 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 VCXQ9H320 206 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 FGF20Q9NP95 211 aaPredicted RBP11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 SLC7A11Q9UPY5 501 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 HSPE1-MOB4S4R3N1 261 aa11.49□□□□□ -0.57
HERPUD1-218ENST00000569569 LOC107986453A0A1B0GWG9 222 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 IRGMA1A4Y4 181 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 H0YAE9 185 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 DVL1O14640 695 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 GPR37O15354 613 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 GATBO75879 557 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 PPIAL4GP0DN37 164 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 CAPGP40121 348 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 HAAOP46952 286 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 NANOS3P60323 173 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 GMFBP60983 142 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 MRPL28Q13084 256 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 ALKBH1Q13686 389 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 ATPAF1Q5TC12 328 aaPredicted RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 HAVCR2Q8TDQ0 301 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 CCL13Q99616 98 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 MDFIQ99750 246 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 DNTTIP1Q9H147 329 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 RASSF4Q9H2L5 321 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 ISG20L2Q9H9L3 353 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 RASL12Q9NYN1 266 aa11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
HERPUD1-218ENST00000569569 ERICH4A6NGS2 130 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 C22orf46C9J442 243 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 TCF21O43680 179 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 ECDO95905 644 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 FSHBP01225 129 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 LIPFP07098 398 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 RPSAP08865 295 aaKnown RBP11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 EPHA1P21709 976 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 DCKP27707 260 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 TGM4P49221 684 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 SLC34A1Q06495 639 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 UBE2V2Q15819 145 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 ARMCX4Q5H9R4 360 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 STUMQ69YW2 141 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 OR5T2Q8NGG2 359 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 PP6455Q8WZ26 134 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 TMIGD2Q96BF3 282 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 JAM3Q9BX67 310 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 CHST5Q9GZS9 411 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 SMURF1Q9HCE7 757 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 SNTG1Q9NSN8 517 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 NLKQ9UBE8 527 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 NKX1-2Q9UD57 310 aaPredicted RBP11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 HHLA2Q9UM44 414 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
HERPUD1-218ENST00000569569 A0A0A6YYJ9 748 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 OR4C45A6NMZ5 311 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 OR2AT4A6NND4 320 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 J3QT63 122 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 NDUFB3O43676 98 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 FCN3O75636 299 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 LIMS3P0CW19 117 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 LIMS4P0CW20 117 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 AMY2BP19961 511 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 FPR2P25090 351 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 FUT6P51993 359 aa11.46□□□□□ -0.57
HERPUD1-218ENST00000569569 GBX2P52951 348 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms