RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TBPP20226 339 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 NTSR1P30989 418 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 CSNK1EP49674 416 aaKnown RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 OR8G1Q15617 311 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 FAHD2BQ6P2I3 314 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 ATG4DQ86TL0 474 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 SLC26A10Q8NG04 563 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 VOPP1Q96AW1 172 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 RSPRY1Q96DX4 576 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 FAHD2AQ96GK7 314 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 SCN5AQ14524 2016 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 FGF16O43320 207 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 SERPINE2P07093 398 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 GSTP1P09211 210 aaKnown RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 PGA4P0DJD7 388 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 PGA5P0DJD9 388 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 PAX6P26367 422 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 DUSP1P28562 367 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 HSF1Q00613 529 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 RUNX1Q01196 453 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 MPV17LQ2QL34 196 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 CCDC54Q8NEL0 328 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 OR5C1Q8NGR4 320 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 MALSU1Q96EH3 234 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 SDSLQ96GA7 329 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 THAP10Q9P2Z0 257 aaPredicted RBP9.68□□□□□ -0.86
PALB2-206ENST00000568219 PIGLQ9Y2B2 252 aa9.68□□□□□ -0.86
PALB2-206ENST00000568219 BRCA2P51587 3418 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 TERTO14746 1132 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 SPRY1O43609 319 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 LILRB3O75022 631 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 CD1AP06126 327 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 RPS2P15880 293 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 FGF7P21781 194 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 HNRNPA2B1P22626 353 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 COL19A1Q14993 1142 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 LHX8Q68G74 356 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 CATSPERDQ86XM0 798 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 GPHA2Q96T91 129 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 SLC25A31Q9H0C2 315 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 KCNS2Q9ULS6 477 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 GPR132Q9UNW8 380 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 YBX2Q9Y2T7 364 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 DOCK8Q8NF50 2099 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 CDC14BO60729 498 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 DFFBO76075 338 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 LYPD3O95274 346 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 ZNF735P0CB33 412 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 FOXL2P58012 376 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 ERVS71-1P61550 626 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 SGCBQ16585 318 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 RSPO4Q2I0M5 234 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 LILRA6Q6PI73 481 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 SPNS3Q6ZMD2 512 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 HOGA1Q86XE5 327 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 CCDC71LQ8N9Z2 235 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 SLC38A9Q8NBW4 561 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 OR51H1Q8NH63 302 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 NT5CQ8TCD5 201 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 TMEM184BQ9Y519 407 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 LOC285556D6RIA3 1793 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 IGKV1D-42A0A075B6H8 117 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 NPIPB9F8W1W9 429 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 PKIAP61925 76 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 H3F3AP84243 136 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 PMS2P11Q13670 270 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 TMEM176BQ3YBM2 270 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 H1FNTQ75WM6 255 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 ANKRD33Q7Z3H0 272 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 C19orf47Q8N9M1 422 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 OR13G1Q8NGZ3 307 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 SLC25A43Q8WUT9 341 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 RLN3Q8WXF3 142 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 DYRK2Q92630 601 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 MENTQ9BUN1 341 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 KLHL13Q9P2N7 655 aa9.67□□□□□ -0.86
PALB2-206ENST00000568219 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
PALB2-206ENST00000568219 H3BMH7 237 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 H7BYZ3 331 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ST8SIA5O15466 376 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 TGOLN2O43493 480 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ZNF141Q15928 474 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 PIGCQ92535 297 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SMOC1Q9H4F8 434 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 GDE1Q9NZC3 331 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SLC17A4Q9Y2C5 497 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 PLXNB2O15031 1838 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 PATJQ8NI35 1801 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ARHGEF17Q96PE2 2063 aaPredicted RBP9.66□□□□□ -0.86
PALB2-206ENST00000568219 XKRY2A2RUG3 117 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 FIGNL2A6NMB9 653 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 ABHD16AO95870 558 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SPINK2P20155 84 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 BMP5P22003 454 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 SNCAP37840 140 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 RAB4BP61018 213 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 KISS1Q15726 138 aa9.66□□□□□ -0.86
PALB2-206ENST00000568219 FIP1L1Q6UN15 594 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms