RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ADPRHL1Q8NDY3 354 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 NPIPA2E9PIF3 369 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 NPIPA3F8WFD2 350 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 MTRF1O75570 445 aaKnown RBP12.48□□□□□ -0.41
CDH1-209ENST00000566510 GLI4P10075 376 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 LYL1P12980 280 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 PRF1P14222 555 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 ADH6P28332 368 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 CACNA1EQ15878 2313 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 C10orf91Q5T1B1 145 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 GUSBP11Q6P575 273 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 GNRHR2Q96P88 292 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
CDH1-209ENST00000566510 NELFAQ9H3P2 528 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 RCC2Q9P258 522 aaKnown RBP12.48□□□□□ -0.41
CDH1-209ENST00000566510 DNAJB11Q9UBS4 358 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 HDGFL3Q9Y3E1 203 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 ADAMTS20P59510 1910 aa12.48□□□□□ -0.41
CDH1-209ENST00000566510 FAM230AA0A1W2PPH8 454 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 IFNA21P01568 189 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 H2AFB1P0C5Y9 115 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 ZNF708P17019 499 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 FCGR2CP31995 323 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 OPRM1P35372 400 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 MTCP1P56278 107 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 SWI5Q1ZZU3 235 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 SP6Q3SY56 376 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 RAET1LQ5VY80 246 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 SLC25A43Q8WUT9 341 aaPredicted RBP12.47□□□□□ -0.41
CDH1-209ENST00000566510 SAT2Q96F10 170 aaPredicted RBP12.47□□□□□ -0.41
CDH1-209ENST00000566510 SMIM8Q96KF7 97 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 UCN2Q96RP3 112 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 CMSS1Q9BQ75 279 aaKnown RBP12.47□□□□□ -0.41
CDH1-209ENST00000566510 SULT4A1Q9BR01 284 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 FAAP24Q9BTP7 215 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 CNTNAP3Q9BZ76 1288 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 GHRLQ9UBU3 117 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 CELA2AP08217 269 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 THBS4P35443 961 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
CDH1-209ENST00000566510 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 TAF9Q16594 264 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 CRIP3Q6Q6R5 217 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 OR2AE1Q8NHA4 323 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 RXFP4Q8TDU9 374 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 HAS2Q92819 552 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 SHDQ96IW2 340 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 SPSB2Q99619 263 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 PIGQQ9BRB3 760 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 MTCH2Q9Y6C9 303 aa12.47□□□□□ -0.41
CDH1-209ENST00000566510 M0R135 149 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 TAAR5O14804 337 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 SPRY1O43609 319 aaPredicted RBP12.46□□□□□ -0.41
CDH1-209ENST00000566510 CRYBA1P05813 215 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 SPP1P10451 314 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 NAT2P11245 290 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 RFC3P40938 356 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 AKR1C3P42330 323 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 TMEM33P57088 247 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 FXYD4P59646 89 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 Q6ZRG5 221 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 PP6455Q8WZ26 134 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 ZNF799Q96GE5 643 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 PADI1Q9ULC6 663 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 GDF9O60383 454 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 CST4P01036 141 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 LSM6P62312 80 aaKnown RBP12.46□□□□□ -0.41
CDH1-209ENST00000566510 PEA15Q15121 130 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 SNAI3Q3KNW1 292 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 SHEQ5VZ18 495 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 RHBDD1Q8TEB9 315 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 RNF138Q8WVD3 245 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
CDH1-209ENST00000566510 AKR1E2Q96JD6 320 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 C12orf57Q99622 126 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 CHST5Q9GZS9 411 aa12.46□□□□□ -0.41
CDH1-209ENST00000566510 C19orf25Q9UFG5 118 aaPredicted RBP12.46□□□□□ -0.41
CDH1-209ENST00000566510 DMDP11532 3685 aa12.46□□□□□ -0.42
CDH1-209ENST00000566510 ZNF98A6NK75 572 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 TP53I11O14683 189 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 OR5H8P0DN80 308 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 PNLIPP16233 465 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 CCL7P80098 99 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 SPEM2Q0P670 501 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 IL15RAQ13261 267 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
CDH1-209ENST00000566510 RSU1Q15404 277 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 GGNBP1Q5YKI7 109 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 C20orf196Q8IYI0 205 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 ZNF581Q9P0T4 197 aa12.45□□□□□ -0.42
CDH1-209ENST00000566510 CHCHD2Q9Y6H1 151 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms