RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ESRP2Q9H6T0 727 aaKnown RBP16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 PALMDQ9NP74 551 aa16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 EXTL2Q9UBQ6 330 aa16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 GPR160Q9UJ42 338 aa16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 PURGQ9UJV8 347 aaKnown RBP16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 V9GYH0 126 aa16.33■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM272A0A1B0GTI8 110 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 DPRXA6NFQ7 191 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR5B21A6NL26 309 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 EIF4EP06730 217 aaKnown RBP16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 NAT2P11245 290 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF250P15622 560 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 PTGFRP43088 359 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 NR4A2P43354 598 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 FAM189A2Q15884 450 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 FAM131AQ6UXB0 335 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 SYNPRQ8TBG9 265 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 NPRL2Q8WTW4 380 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 SPACA5Q96QH8 159 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 S100A13Q99584 98 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 AKAP9Q99996 3911 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 RHBDL2Q9NX52 303 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 RAB22AQ9UL26 194 aa16.32■□□□□ 0.2
CSPG4P13-201ENST00000565545 FAM230AA0A1W2PPH8 454 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 PQLC2LA1A4F0 135 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 ATP6V1G2-DDX39BF2Z307 99 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 MPV17P39210 176 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 TFF3Q07654 80 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 CRIP3Q6Q6R5 217 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 GLIPR1L1Q6UWM5 242 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 CMTM4Q8IZR5 234 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 ACBD4Q8NC06 268 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR8G5Q8NG78 346 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 C15orf40Q8WUR7 153 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR5P3Q8WZ94 311 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 ITPKCQ96DU7 683 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 SLC25A38Q96DW6 304 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 RADILQ96JH8 1075 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 HCFC1P51610 2035 aa16.31■□□□□ 0.2
CSPG4P13-201ENST00000565545 VSTM5A8MXK1 200 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 IGHV3-13P01766 116 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR3A4PP47883 348 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 FABP6P51161 128 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 SELENOVP59797 346 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZP1P60852 638 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 BSPH1Q075Z2 132 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 GPR176Q14439 515 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 NCMAPQ5T1S8 102 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 ASCL4Q6XD76 172 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 GDPD1Q8N9F7 314 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 SPERTQ8NA61 448 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZSCAN4Q8NAM6 433 aaPredicted RBP16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 BHLHE23Q8NDY6 225 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 PXT1Q8NFP0 134 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 OR4M1Q8NGD0 313 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 KCNG3Q8TAE7 436 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM171Q8WVE6 324 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 TNFAIP8L1Q8WVP5 186 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 MICU1Q9BPX6 476 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 CCDC32Q9BV29 185 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 PCDHB16Q9NRJ7 776 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM100Q9NV29 134 aa16.3■□□□□ 0.2
CSPG4P13-201ENST00000565545 A0A0A6YYH2 397 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 METTL21EPA6NDL7 271 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 TUBAL3A6NHL2 446 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 A6NJ64 397 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM14DPA8MWL7 114 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 ABCD4O14678 606 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 TIMM8AO60220 97 aaPredicted RBP16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF780AO75290 641 aaPredicted RBP16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 SCGNO76038 276 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 CA6P23280 308 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 PITPNBP48739 271 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 GNG3P63215 75 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 QRFPP83859 136 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 PITPNAQ00169 270 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 IL18Q14116 193 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 KRTAP21-3Q3LHN1 58 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 PYHIN1Q6K0P9 492 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM200AQ86VY9 491 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 HPSE2Q8WWQ2 592 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 RNF170Q96K19 258 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 RTL8AQ9BWD3 113 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 CST11Q9H112 138 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 PPP1R3EQ9H7J1 279 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF442Q9H7R0 627 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 DIABLOQ9NR28 239 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 CRIM1Q9NZV1 1036 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 ING4Q9UNL4 249 aa16.29■□□□□ 0.2
CSPG4P13-201ENST00000565545 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 IGLV3-9A0A075B6K5 115 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 IGKV1-27A0A075B6S5 117 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 A0A1B0GWJ7 208 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 ZNF732B4DXR9 585 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 J3QRK9 145 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 LILRA1O75019 489 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 TMEM225BP0DP42 221 aa16.28■□□□□ 0.2
CSPG4P13-201ENST00000565545 VSIG8P0DPA2 414 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms