RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GABRA2P47869 451 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 GNG3P63215 75 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 PTGES3Q15185 160 aaKnown RBP19.42■□□□□ 0.7
RAB40C-209ENST00000565511 CEACAM21Q3KPI0 293 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 DNAL1Q4LDG9 190 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 MOB3CQ70IA8 216 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 COMMD2Q86X83 199 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 CMTM4Q8IZR5 234 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 DMRTB1Q96MA1 342 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 YY1AP1Q9H869 796 aa19.42■□□□□ 0.7
RAB40C-209ENST00000565511 NUFIP1Q9UHK0 495 aaKnown RBP19.42■□□□□ 0.7
RAB40C-209ENST00000565511 ACOD1A6NK06 481 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 CAV3P56539 151 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 RPL15P61313 204 aaKnown RBP19.41■□□□□ 0.7
RAB40C-209ENST00000565511 DEFA6Q01524 100 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 PLCXD3Q63HM9 321 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 HAGHLQ6PII5 290 aaPredicted RBP19.41■□□□□ 0.7
RAB40C-209ENST00000565511 DEGS2Q6QHC5 323 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 ZNF679Q8IYX0 411 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 DUS3LQ96G46 650 aaKnown RBP19.41■□□□□ 0.7
RAB40C-209ENST00000565511 MED30Q96HR3 178 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 AJUBAQ96IF1 538 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 APOL4Q9BPW4 351 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 CADM1Q9BY67 442 aaKnown RBP19.41■□□□□ 0.7
RAB40C-209ENST00000565511 PIGLQ9Y2B2 252 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 FAM96BQ9Y3D0 163 aa19.41■□□□□ 0.7
RAB40C-209ENST00000565511 SYNGR1O43759 233 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 FBP1P09467 338 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 PAX6P26367 422 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 CEBPDP49716 269 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-209ENST00000565511 LCN1P1Q5VSP4 162 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 ASPHD2Q6ICH7 369 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 KCTD18Q6PI47 426 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-209ENST00000565511 BATF2Q8N1L9 274 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 CD177Q8N6Q3 437 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 ZSCAN4Q8NAM6 433 aaPredicted RBP19.4■□□□□ 0.7
RAB40C-209ENST00000565511 TMEM185AQ8NFB2 350 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 HIST1H2AAQ96QV6 131 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 CNN2Q99439 309 aaKnown RBP19.4■□□□□ 0.7
RAB40C-209ENST00000565511 MROQ9BYG7 248 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 ADGRL4Q9HBW9 690 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 C19orf12Q9NSK7 152 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 VPREB3Q9UKI3 123 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 IKZF2Q9UKS7 526 aa19.4■□□□□ 0.7
RAB40C-209ENST00000565511 A0A1W2PQ09 198 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 M0R1W7 72 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 DNAJC8O75937 253 aaPredicted RBP19.39■□□□□ 0.69
RAB40C-209ENST00000565511 CLPXO76031 633 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 HOXB6P17509 224 aaKnown RBP19.39■□□□□ 0.69
RAB40C-209ENST00000565511 RIDAP52758 137 aaKnown RBP19.39■□□□□ 0.69
RAB40C-209ENST00000565511 EFNB1P98172 346 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 GUCA2AQ02747 115 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 RIPPLY1Q0D2K3 151 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 AADACL4Q5VUY2 407 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 OR5A2Q8NGI9 324 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 NRBF2Q96F24 287 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 SDSLQ96GA7 329 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 DPAGT1Q9H3H5 408 aa19.39■□□□□ 0.69
RAB40C-209ENST00000565511 A0A1B0GTI1 187 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 MEIOCA2RUB1 952 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 OR5B21A6NL26 309 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 MTRF1O75570 445 aaKnown RBP19.38■□□□□ 0.69
RAB40C-209ENST00000565511 ZNF829Q3KNS6 432 aaPredicted RBP19.38■□□□□ 0.69
RAB40C-209ENST00000565511 ACP7Q6ZNF0 438 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 MEPCEQ7L2J0 689 aaKnown RBP19.38■□□□□ 0.69
RAB40C-209ENST00000565511 SSX6Q7RTT6 188 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 THAP5Q7Z6K1 395 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 SLC35F2Q8IXU6 374 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 FAM185AQ8N0U4 392 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 TCEANCQ8N8B7 351 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 DNAJC9Q8WXX5 260 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 GPR173Q9NS66 373 aa19.38■□□□□ 0.69
RAB40C-209ENST00000565511 MRM2Q9UI43 246 aaKnown RBP19.38■□□□□ 0.69
RAB40C-209ENST00000565511 A6NIN4 97 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 ZNF254O75437 659 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 DHRS3O75911 302 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 ATP6V1B1P15313 513 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 EEF1B2P24534 225 aaKnown RBP19.37■□□□□ 0.69
RAB40C-209ENST00000565511 UBE2E1P51965 193 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 CXCR4P61073 352 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 MIDNQ504T8 468 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 SLX4IPQ5VYV7 408 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 C12orf73Q69YU5 71 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 ZNF322Q6U7Q0 402 aaPredicted RBP19.37■□□□□ 0.69
RAB40C-209ENST00000565511 GDPGP1Q6ZNW5 385 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 C1orf122Q6ZSJ8 110 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 POC1AQ8NBT0 407 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 OR5K1Q8NHB7 308 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 BCAS4Q8TDM0 211 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 NPRL2Q8WTW4 380 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 ASB17Q8WXJ9 295 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 TEX12Q9BXU0 123 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 METTL8Q9H825 291 aaKnown RBP19.37■□□□□ 0.69
RAB40C-209ENST00000565511 FAM53CQ9NYF3 392 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 ENPP5Q9UJA9 477 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 GTF2A1LQ9UNN4 478 aa19.37■□□□□ 0.69
RAB40C-209ENST00000565511 RFPL4AA6NLU0 287 aa19.36■□□□□ 0.69
RAB40C-209ENST00000565511 ZAR1LA6NP61 321 aa19.36■□□□□ 0.69
RAB40C-209ENST00000565511 RFPL4AL1F8VTS6 287 aa19.36■□□□□ 0.69
RAB40C-209ENST00000565511 GSC2O15499 205 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms