RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 GOLGA8TH3BQL2 631 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 HBE1P02100 147 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 S100A9P06702 114 aaKnown RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 STAG3L3P0CL85 134 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 ERGP11308 486 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 CTRB1P17538 263 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 IGFBP3P17936 291 aaPredicted RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 RPS5P46782 204 aaKnown RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 PPP1CBP62140 327 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 SARNPP82979 210 aaKnown RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 XRCC4Q13426 336 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 TFDP2Q14188 446 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 IRF4Q15306 451 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 UAP1Q16222 522 aaPredicted RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 KRTAP13-3Q3SY46 172 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 STUMQ69YW2 141 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 FAM71E1Q6IPT2 247 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 NANOGP8Q6NSW7 305 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 PRMT9Q6P2P2 845 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 Q6ZR03 302 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 TMCO2Q7Z6W1 182 aaPredicted RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 RIMKLAQ8IXN7 391 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 DAW1Q8N136 415 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 CBR4Q8N4T8 237 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 OR2L8Q8NGY9 312 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 OR8K3Q8NH51 312 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 OR51E1Q8TCB6 317 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 ANKRD36BP1Q96IX9 119 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 PORCNQ9H237 461 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 MRM3Q9HC36 420 aaKnown RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 ACP6Q9NPH0 428 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF302Q9NR11 478 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 BATF3Q9NR55 127 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 SNX24Q9Y343 169 aa2.86□□□□□ -1.95
LINC00560-201ENST00000564593 PDCD11Q14690 1871 aaKnown RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 NUP214P35658 2090 aaPredicted RBP2.86□□□□□ -1.95
LINC00560-201ENST00000564593 LCTP09848 1927 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 TMEM120BA0PK00 339 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 SMIM23A6NLE4 172 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 NCBP2LA6PVI3 153 aaKnown RBP2.85□□□□□ -1.95
LINC00560-201ENST00000564593 SUPT3HB4E1H0 165 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 H7C417 338 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 I3L4J1 428 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 B4GALT5O43286 388 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 HLA-DRAP01903 254 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 PSMC3P17980 439 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 CSNK2A2P19784 350 aaPredicted RBP2.85□□□□□ -1.95
LINC00560-201ENST00000564593 CPN2P22792 545 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 SSTR5P35346 364 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 TNFSF9P41273 254 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 CARD18P57730 90 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 MYL6P60660 151 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 UBE2MP61081 183 aaKnown RBP2.85□□□□□ -1.95
LINC00560-201ENST00000564593 SYCNQ0VAF6 134 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 FBXO48Q5FWF7 155 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 BEX5Q5H9J7 111 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 FAM78AQ5JUQ0 283 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 HHATQ5VTY9 493 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 SNX31Q8N9S9 440 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 OR56A4Q8NGH8 313 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 OR52E5Q8NH55 327 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 UBALD1Q8TB05 177 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 PIFOQ8TCI5 191 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 LRRC39Q96DD0 335 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 C19orf60Q96EN9 201 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 TIMM17AQ99595 171 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 VCX3BQ9H321 246 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 PIGUQ9H490 435 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 GOLPH3Q9H4A6 298 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 ZNF430Q9H8G1 570 aaPredicted RBP2.85□□□□□ -1.95
LINC00560-201ENST00000564593 CYP3A43Q9HB55 503 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 LYRM4Q9HD34 91 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 ZDHHC4Q9NPG8 344 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 FGFR1OP2Q9NVK5 253 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 MTFP1Q9UDX5 166 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 YTHDF2Q9Y5A9 579 aaKnown RBP2.85□□□□□ -1.95
LINC00560-201ENST00000564593 USH1CQ9Y6N9 552 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 OTOFQ9HC10 1997 aa2.85□□□□□ -1.95
LINC00560-201ENST00000564593 COL1A2P08123 1366 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 PLXNB2O15031 1838 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 MCM3APO60318 1980 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 GOLGA8QA0A0J9YX86 632 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 A0A1B0GTQ1 180 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 TSPAN11A1L157 253 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 APOC4-APOC2K7ER74 178 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 NDUFS8O00217 210 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 LIN7AO14910 233 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 FCN3O75636 299 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 OTCP00480 354 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 ASS1P00966 412 aaKnown RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 HLA-HP01893 362 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 APOC2P02655 101 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 PRB2P02812 416 aaPredicted RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 IFNW1P05000 195 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 UBCP0CG48 685 aaKnown RBP2.84□□□□□ -1.95
LINC00560-201ENST00000564593 NEFHP12036 1026 aa2.84□□□□□ -1.95
LINC00560-201ENST00000564593 DTYMKP23919 212 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms