RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LHX4Q969G2 390 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ITFG2Q969R8 447 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 SLC25A28Q96A46 364 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 EME1Q96AY2 570 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 CNTD2Q9H8S5 307 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 GPR173Q9NS66 373 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 ONECUT1Q9UBC0 465 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 V9GYS6 101 aa16.48■□□□□ 0.23
SHCBP1-203ENST00000564272 A6NIN4 97 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 CLDN34H7C241 214 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 OR2T7P0C7T2 308 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 HKR1P10072 659 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 DGUOKQ16854 277 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 LRRC10Q5BKY1 277 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 CLVS2Q5SYC1 327 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 ZNF684Q5T5D7 378 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 ZNF788Q6ZQV5 615 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 PDZD9Q8IXQ8 264 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 LY6G5BQ8NDX9 201 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 OR14K1Q8NGZ2 314 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 OR2T27Q8NH04 317 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 H1FXQ92522 213 aaKnown RBP16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 UBE2FQ969M7 185 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 ZDHHC16Q969W1 377 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 DCTN5Q9BTE1 182 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 DNTTIP1Q9H147 329 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 IMPAD1Q9NX62 359 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 USE1Q9NZ43 259 aa16.47■□□□□ 0.23
SHCBP1-203ENST00000564272 IGKV1D-17A0A075B6S4 117 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 OR2AT4A6NND4 320 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 H3BSH0 61 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 HOXA3O43365 443 aaPredicted RBP16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 ATP6V1E1P36543 226 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 BPIFB3P59826 476 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 IL13RA1P78552 427 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 PDCD1Q15116 288 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 ZIK1Q3SY52 487 aaPredicted RBP16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 CDONQ4KMG0 1287 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 TMEM42Q69YG0 159 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 VMO1Q7Z5L0 202 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 CATSPERDQ86XM0 798 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 GATAD2BQ8WXI9 593 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 TMIGD2Q96BF3 282 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 ZNF488Q96MN9 340 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 SLC25A10Q9UBX3 287 aaPredicted RBP16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 ORC6Q9Y5N6 252 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 KPTNQ9Y664 436 aa16.46■□□□□ 0.23
SHCBP1-203ENST00000564272 IGHV1-69DA0A0B4J2H0 117 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 METTL15A6NJ78 407 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 SIGLEC5O15389 551 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 SYNGR1O43759 233 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 IGHV1-69P01742 117 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 CCL1P22362 96 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 GABRA2P47869 451 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 ZNF85Q03923 595 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 PRB3Q04118 309 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 ZFP1Q6P2D0 407 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 CBR4Q8N4T8 237 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 ZNF671Q8TAW3 534 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 RORBQ92753 470 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 RFKQ969G6 155 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 PRDM13Q9H4Q3 707 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 ELL3Q9HB65 397 aaPredicted RBP16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 TNFRSF19Q9NS68 423 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 ZNF222Q9UK12 451 aa16.45■□□□□ 0.22
SHCBP1-203ENST00000564272 PQLC2LA1A4F0 135 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 J3QT63 122 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 DLGAP1O14490 977 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 GPR37O15354 613 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 ENTPD6O75354 484 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 ACAA1P09110 424 aaPredicted RBP16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 PSG2P11465 335 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 NDUFB7P17568 137 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 HAAOP46952 286 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 ALDH3A2P51648 485 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 DLX1P56177 255 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 TMED1Q13445 227 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 TP53I3Q53FA7 332 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 Q6ZSR3 168 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 BATF2Q8N1L9 274 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 POC1AQ8NBT0 407 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 C8orf46Q8TAG6 207 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 MED30Q96HR3 178 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 HRASLS5Q96KN8 279 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 MBOAT4Q96T53 435 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 SIRT7Q9NRC8 400 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 ACOXLQ9NUZ1 547 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 GNG8Q9UK08 70 aa16.44■□□□□ 0.22
SHCBP1-203ENST00000564272 A0A1B0GVI7 797 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 DHRS7CA6NNS2 312 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 SULT1C4O75897 302 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 FOXL1Q12952 345 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 Q6YL49 198 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 ACP7Q6ZNF0 438 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 KIR3DL3Q8N743 410 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 ZNRF1Q8ND25 227 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 TMEM185AQ8NFB2 350 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 TRMT10AQ8TBZ6 339 aaKnown RBP16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 NOX4Q9NPH5 578 aa16.43■□□□□ 0.22
SHCBP1-203ENST00000564272 PCDHGB1Q9Y5G3 927 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms