RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 GLRA1P23415 457 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 TMEM42Q69YG0 159 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 PRSS35Q8N3Z0 413 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 ZNF671Q8TAW3 534 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 ZFAND2BQ8WV99 257 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 AQP3Q92482 292 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 ADI1Q9BV57 179 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 PLEKHA1Q9HB21 404 aa25.47■■□□□ 1.67
CMTM4-204ENST00000563952 FBN3Q75N90 2809 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 LOC100130705A0A1B0GUX0 176 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 ZNF879B4DU55 563 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 DLGAP1O14490 977 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 NDUFB3O43676 98 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 LIPFP07098 398 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 GABRB1P18505 474 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 AMY2BP19961 511 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 ZSCAN26Q16670 478 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 ESM1Q9NQ30 184 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 FAM118AQ9NWS6 357 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 NLKQ9UBE8 527 aa25.46■■□□□ 1.67
CMTM4-204ENST00000563952 DHRS7CA6NNS2 312 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 J3QRE1 110 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 ECDO95905 644 aaPredicted RBP25.45■■□□□ 1.66
CMTM4-204ENST00000563952 SFTPBP07988 381 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 ISL1P61371 349 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 Q6ZSR3 168 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 TMIGD2Q96BF3 282 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 LGALS12Q96DT0 336 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 PCDHGB1Q9Y5G3 927 aa25.45■■□□□ 1.66
CMTM4-204ENST00000563952 STAB1Q9NY15 2570 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 MPZL2O60487 215 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 TOX4O94842 621 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 SELLP14151 372 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 KIR3DL2P43630 455 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 HAAOP46952 286 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF91Q05481 1191 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 LRRC10Q5BKY1 277 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 ATPAF1Q5TC12 328 aaPredicted RBP25.44■■□□□ 1.66
CMTM4-204ENST00000563952 ZDHHC22Q8N966 263 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 DNTTIP1Q9H147 329 aa25.44■■□□□ 1.66
CMTM4-204ENST00000563952 RPUSD1Q9UJJ7 312 aaKnown RBP25.44■■□□□ 1.66
CMTM4-204ENST00000563952 EXOGQ9Y2C4 368 aaKnown RBP25.44■■□□□ 1.66
CMTM4-204ENST00000563952 SOX21Q9Y651 276 aaPredicted RBP25.44■■□□□ 1.66
CMTM4-204ENST00000563952 PQLC2LA1A4F0 135 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 ANKRD61A6NGH8 418 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 OR2AT4A6NND4 320 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 SLC16A6O15403 523 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 PLATP00750 562 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 DBTP11182 482 aaKnown RBP25.43■■□□□ 1.66
CMTM4-204ENST00000563952 GABRA2P47869 451 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 TGM4P49221 684 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 OR12D2P58182 307 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 CDONQ4KMG0 1287 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 METTL11BQ5VVY1 283 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF573Q86YE8 665 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 RDH10Q8IZV5 341 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 ACBD7Q8N6N7 88 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 RHOXF1Q8NHV9 184 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 ANGPTL6Q8NI99 470 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 Q96MT0 163 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 GAFA1Q96PS6 74 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 AMBNQ9NP70 447 aa25.43■■□□□ 1.66
CMTM4-204ENST00000563952 LOC107986453A0A1B0GWG9 222 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 SYNGR1O43759 233 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ARF6P62330 175 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ACTG1P63261 375 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 C11orf91Q3C1V1 193 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 GPR157Q5UAW9 335 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 BRD3OSQ6XYD6 125 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF788Q6ZQV5 615 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 KCTD20Q7Z5Y7 419 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF555Q8NEP9 628 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 TRMT10AQ8TBZ6 339 aaKnown RBP25.42■■□□□ 1.66
CMTM4-204ENST00000563952 NPRL2Q8WTW4 380 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 FAM216AQ8WUB2 273 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 RNF166Q96A37 237 aaPredicted RBP25.42■■□□□ 1.66
CMTM4-204ENST00000563952 MED30Q96HR3 178 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF488Q96MN9 340 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF48Q96MX3 618 aaPredicted RBP25.42■■□□□ 1.66
CMTM4-204ENST00000563952 WDFY2Q96P53 400 aa25.42■■□□□ 1.66
CMTM4-204ENST00000563952 SMPD3Q9NY59 655 aaPredicted RBP25.42■■□□□ 1.66
CMTM4-204ENST00000563952 J3QT63 122 aa25.41■■□□□ 1.66
CMTM4-204ENST00000563952 UBCP0CG48 685 aaKnown RBP25.41■■□□□ 1.66
CMTM4-204ENST00000563952 IL13RA1P78552 427 aa25.41■■□□□ 1.66
CMTM4-204ENST00000563952 OR2G2Q8NGZ5 317 aa25.41■■□□□ 1.66
CMTM4-204ENST00000563952 H1FXQ92522 213 aaKnown RBP25.41■■□□□ 1.66
CMTM4-204ENST00000563952 TBX15Q96SF7 602 aa25.41■■□□□ 1.66
CMTM4-204ENST00000563952 CNTD2Q9H8S5 307 aa25.41■■□□□ 1.66
CMTM4-204ENST00000563952 FAM230AA0A1W2PPH8 454 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 J3QLW9 94 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 PSG2P11465 335 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 MMP9P14780 707 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 ZNF19P17023 458 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 UBA52P62987 128 aaKnown RBP25.4■■□□□ 1.66
CMTM4-204ENST00000563952 DGUOKQ16854 277 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 LRRC36Q1X8D7 754 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 TUSC1Q2TAM9 212 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 C9orf139Q6ZV77 190 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 POC1AQ8NBT0 407 aa25.4■■□□□ 1.66
CMTM4-204ENST00000563952 CCDC54Q8NEL0 328 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms