RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 NDE1Q9NXR1 346 aa13.46□□□□□ -0.25
CMTM3-205ENST00000562707 RASL12Q9NYN1 266 aa13.46□□□□□ -0.25
CMTM3-205ENST00000562707 ZNF222Q9UK12 451 aa13.46□□□□□ -0.25
CMTM3-205ENST00000562707 SAMHD1Q9Y3Z3 626 aaKnown RBP13.46□□□□□ -0.25
CMTM3-205ENST00000562707 U3KQV3 271 aa13.46□□□□□ -0.25
CMTM3-205ENST00000562707 H3BN98 237 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 COX7A1P24310 79 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 MAGEA2P43356 314 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 BMXP51813 675 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 PSMA6P60900 246 aaKnown RBP13.45□□□□□ -0.26
CMTM3-205ENST00000562707 RPL31P62899 125 aaKnown RBP13.45□□□□□ -0.26
CMTM3-205ENST00000562707 CEACAM21Q3KPI0 293 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 CEP78Q5JTW2 689 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 TMEM200BQ69YZ2 307 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 THAP5Q7Z6K1 395 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 OR4F17Q8NGA8 305 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 OR5A2Q8NGI9 324 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 ITFG2Q969R8 447 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 R3HDM4Q96D70 268 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 OR4F4Q96R69 305 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 ACTR3BQ9P1U1 418 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
CMTM3-205ENST00000562707 OR5B21A6NL26 309 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 RFPL4AA6NLU0 287 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 PRR23D1E9PI22 279 aaPredicted RBP13.44□□□□□ -0.26
CMTM3-205ENST00000562707 RFPL4AL1F8VTS6 287 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 SLC1A7O00341 560 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 GSC2O15499 205 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 CHST1O43916 411 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 SELENOFO60613 162 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 PEX14O75381 377 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 PRR23D2P0DMB1 279 aaPredicted RBP13.44□□□□□ -0.26
CMTM3-205ENST00000562707 OR2T5Q6IEZ7 315 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 HAGHLQ6PII5 290 aaPredicted RBP13.44□□□□□ -0.26
CMTM3-205ENST00000562707 CD300LDQ6UXZ3 194 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 MOB3CQ70IA8 216 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 KRT77Q7Z794 578 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 NDUFA11Q86Y39 141 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 DEFB107AQ8IZN7 70 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 ZNF561Q8N587 486 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 IQCF1Q8N6M8 205 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 OR2T29Q8NH02 315 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 PIFOQ8TCI5 191 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 AQP3Q92482 292 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 CDCA4Q9BXL8 241 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 FAM107BQ9H098 131 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 MMP28Q9H239 520 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 C1orf21Q9H246 121 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 MAGIXQ9H6Y5 334 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 USE1Q9NZ43 259 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 TAGLN3Q9UI15 199 aa13.44□□□□□ -0.26
CMTM3-205ENST00000562707 MTRF1O75570 445 aaKnown RBP13.43□□□□□ -0.26
CMTM3-205ENST00000562707 CD28P10747 220 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ATP6V1B1P15313 513 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 PRDX2P32119 198 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ERVFRD-1P60508 538 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 SMIM21Q3B7S5 101 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 PLBD1Q6P4A8 553 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ACP7Q6ZNF0 438 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 KRT74Q7RTS7 529 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 COMMD2Q86X83 199 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 CD177Q8N6Q3 437 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 OR10G2Q8NGC3 310 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 OR2T27Q8NH04 317 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 PRSS22Q9GZN4 317 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ABCB10Q9NRK6 738 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 SERTAD4Q9NUC0 356 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 ZNF446Q9NWS9 450 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 VNN3Q9NY84 501 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 PITPNC1Q9UKF7 332 aa13.43□□□□□ -0.26
CMTM3-205ENST00000562707 A0A0U1RQV5 110 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 ACOD1A6NK06 481 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 VGLL3A8MV65 326 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 SNX3O60493 162 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 FAHP16930 419 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 ATP6V1B2P21281 511 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 RIPPLY1Q0D2K3 151 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 HABP2Q14520 560 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-205ENST00000562707 FAM98BQ52LJ0 330 aaKnown RBP13.42□□□□□ -0.26
CMTM3-205ENST00000562707 PLA1AQ53H76 456 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 PLCXD3Q63HM9 321 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 Q8N2B8 174 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 C11orf42Q8N5U0 333 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 POC1AQ8NBT0 407 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 OR4M1Q8NGD0 313 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 NIPSNAP1Q9BPW8 284 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 MED4Q9NPJ6 270 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-205ENST00000562707 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
CMTM3-205ENST00000562707 TMEM269A0A1B0GVZ9 245 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 FAM90A8PA6NJQ4 464 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 PRODHO43272 600 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 CCL3L1P16619 93 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 RAB13P51153 203 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 RPS7P62081 194 aaKnown RBP13.41□□□□□ -0.26
CMTM3-205ENST00000562707 CNN3Q15417 329 aaKnown RBP13.41□□□□□ -0.26
CMTM3-205ENST00000562707 ARSJQ5FYB0 599 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-205ENST00000562707 DMRTC1Q5HYR2 192 aa13.41□□□□□ -0.26
CMTM3-205ENST00000562707 ZBTB37Q5TC79 503 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms