RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PKMYT1Q99640 499 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 ARV1Q9H2C2 271 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 TRIM45Q9H8W5 580 aaPredicted RBP1.35□□□□□ -2.19
DENND4A-205ENST00000562540 CA10Q9NS85 328 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 RPRD2Q5VT52 1461 aaKnown RBP1.35□□□□□ -2.19
DENND4A-205ENST00000562540 ZSWIM8A7E2V4 1837 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 MYO16Q9Y6X6 1858 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 ATG2BQ96BY7 2078 aa1.35□□□□□ -2.19
DENND4A-205ENST00000562540 JCADQ9P266 1359 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 ARPC4-TTLL3A0A0A6YYG9 625 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 TRAV8-4A0A0B4J246 113 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 TRAV8-6A0A0B4J262 113 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 A0A0B4J2E0 115 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 IGKV1-6A0A0C4DH72 117 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 SLC22A20A6NK97 555 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 C4orf51C9J302 202 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 H3BN98 237 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 TRDMT1O14717 391 aaKnown RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 ZBTB5O15062 677 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 HMMRO75330 724 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 FSTL3O95633 263 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 GCGP01275 180 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 P01737 135 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 SLC35G6P0C7Q6 338 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 HLA-GP17693 338 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PMCHP20382 165 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 GABRR2P28476 465 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 ARL2P36404 184 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PSMB2P49721 201 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 OR12D2P58182 307 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PAFAH1B2P68402 229 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 SLC35A1P78382 337 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 LAMTOR4Q0VGL1 99 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 TSC22D1Q15714 1073 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PYDC2Q56P42 97 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 TPRG1LQ5T0D9 272 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 MORN3Q6PF18 240 aaPredicted RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 CLEC2AQ6UVW9 174 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PAGE2Q7Z2X7 111 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 CYB561A3Q8NBI2 242 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PROKR2Q8NFJ6 384 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 OR4C13Q8NGP0 309 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 GLYATL2Q8WU03 294 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PIH1D2Q8WWB5 315 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 OTUB2Q96DC9 234 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 SMARCD1Q96GM5 515 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 OR2V2Q96R30 315 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 NAPGQ99747 312 aaPredicted RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 MS4A8Q9BY19 250 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 NAA50Q9GZZ1 169 aaKnown RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 STMN4Q9H169 189 aaPredicted RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 SND1-IT1Q9HBX3 110 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 ZNF302Q9NR11 478 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 ASF1BQ9NVP2 202 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 STX18Q9P2W9 335 aaKnown RBP1.34□□□□□ -2.19
DENND4A-205ENST00000562540 PPIL1Q9Y3C6 166 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 MMACHCQ9Y4U1 282 aa1.34□□□□□ -2.19
DENND4A-205ENST00000562540 NPHP4O75161 1426 aaPredicted RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF878C9JN71 531 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 DFFAO00273 331 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 CTAG2O75638 210 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 KCNK2O95069 426 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 CXorf1O96002 111 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 OR5AC1P0C628 307 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 PSMD4P55036 377 aaKnown RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 TAS2R39P59534 338 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 RAB11AP62491 216 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 RPL18AQ02543 176 aaKnown RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 RAB11BQ15907 218 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 LIN9Q5TKA1 542 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF660Q6AZW8 331 aaPredicted RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 AMMECR1LQ6DCA0 310 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 TTC19Q6DKK2 380 aaPredicted RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 SLC7A5P1Q8MH63 180 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 OR4D6Q8NGJ1 314 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 OR10Z1Q8NGY1 313 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ZCCHC13Q8WW36 166 aaKnown RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 TMEM234Q8WY98 164 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 NAT6Q93015 286 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 RBPMSQ93062 196 aaKnown RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ISG20Q96AZ6 181 aaKnown RBP1.33□□□□□ -2.2
DENND4A-205ENST00000562540 CERS2Q96G23 380 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ZNF649Q9BS31 505 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ABCG5Q9H222 651 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 OR51B5Q9H339 312 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 DUSP21Q9H596 190 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 OR2S2Q9NQN1 319 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 VAX2Q9UIW0 290 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 ZBED9Q6R2W3 1325 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 LTBP4Q8N2S1 1624 aa1.33□□□□□ -2.2
DENND4A-205ENST00000562540 CENPXA8MT69 81 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 IGHG2P01859 326 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 CDK1P06493 297 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 KLK1P06870 262 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 SNRPAP09012 282 aaKnown RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 KLF3P57682 345 aaPredicted RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 MTPNP58546 118 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 GBE1Q04446 702 aa1.32□□□□□ -2.2
DENND4A-205ENST00000562540 MEF2CQ06413 473 aaPredicted RBP1.32□□□□□ -2.2
DENND4A-205ENST00000562540 FMODQ06828 376 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms