RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PLCXD3Q63HM9 321 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 ZNF826PQ6ZT77 177 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 PEG10Q86TG7 708 aaKnown RBP11.24□□□□□ -0.61
CDH1-204ENST00000562118 GPR148Q8TDV2 347 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 GHSRQ92847 366 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 SPSB1Q96BD6 273 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 C12orf43Q96C57 262 aaKnown RBP11.24□□□□□ -0.61
CDH1-204ENST00000562118 SMR3AQ99954 134 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 PKIBQ9C010 78 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 PLEKHA1Q9HB21 404 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 HES4Q9HCC6 221 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 GPR173Q9NS66 373 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 C1orf123Q9NWV4 160 aa11.24□□□□□ -0.61
CDH1-204ENST00000562118 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 PPIAL4EA0A075B759 164 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 TRBV5-7A0A0A0MS05 114 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 IGHV3-64DA0A0J9YX35 117 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 A6NIN4 97 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PPIAL4DF5H284 164 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 J3QT63 122 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 LGALS8O00214 317 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 CDIPTO14735 213 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 LY6G6DO95868 133 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 GRPP07492 148 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PGA5P0DJD9 388 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PPIAL4FP0DN26 164 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 IGFBP3P17936 291 aaPredicted RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 FSTP19883 344 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PCMT1P22061 227 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 GZMKP49863 264 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 FUT6P51993 359 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 ERVK11-1P61568 191 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 IL24Q13007 206 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 TPBGQ13641 420 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 CNN3Q15417 329 aaKnown RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 KCTD21Q4G0X4 260 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 MOB3CQ70IA8 216 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 ZNF573Q86YE8 665 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 SPICQ8N5J4 248 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 OR13C3Q8NGS6 347 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 DACT3Q96B18 629 aaPredicted RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 FGGYQ96C11 551 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 MSI2Q96DH6 328 aaKnown RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 TMEM246Q9BRR3 403 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PATZ1Q9HBE1 687 aaKnown RBP11.23□□□□□ -0.61
CDH1-204ENST00000562118 TMEM160Q9NX00 188 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 KAAG1Q9UBP8 84 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
CDH1-204ENST00000562118 PPIAL4CA0A0B4J2A2 164 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 OOEPA6NGQ2 149 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 CEACAM18A8MTB9 384 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 SMAD7O15105 426 aaKnown RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 CUBNO60494 3623 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 RHBDL1O75783 438 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 SERPINA3P01011 423 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 WNT2P09544 360 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 MUC1P15941 1255 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 ATF1P18846 271 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 MLLT11Q13015 90 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 Q499Y3 187 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 FAM201AQ5SY85 155 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 ATPAF1Q5TC12 328 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 STUMQ69YW2 141 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 UNQ9370/PRO34162Q6UXP9 181 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 ZNF841Q6ZN19 808 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 DCDC5Q6ZRR9 648 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 CALHM1Q8IU99 346 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 SERPINA12Q8IW75 414 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 POC1AQ8NBT0 407 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 LRRC29Q8WV35 223 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 RAB39BQ96DA2 213 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 OPALINQ96PE5 141 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 NRIP2Q9BQI9 281 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 DNTTIP1Q9H147 329 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 GSX1Q9H4S2 264 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 ZCCHC4Q9H5U6 513 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 METTL17Q9H7H0 456 aaPredicted RBP11.22□□□□□ -0.61
CDH1-204ENST00000562118 ACOT13Q9NPJ3 140 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 DHDHQ9UQ10 334 aa11.22□□□□□ -0.61
CDH1-204ENST00000562118 HIVEP2P31629 2446 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 A6NLC8 198 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 H3BSH0 61 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 NDUFA2O43678 99 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 SULT1B1O43704 296 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 FCN3O75636 299 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 ALDOBP05062 364 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 IRF2P14316 349 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 CPEP16870 476 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 ZNF20P17024 532 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 CELP19835 753 aa11.21□□□□□ -0.61
CDH1-204ENST00000562118 PRKACBP22694 351 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms