RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GSN-AS1Q9NRJ2 163 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 GHRLQ9UBU3 117 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 PADI1Q9ULC6 663 aa12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 NOSIPQ9Y314 301 aaKnown RBP12.27□□□□□ -0.45
VPS9D1-202ENST00000561976 DHRS7CA6NNS2 312 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 E9PLN8 166 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 F5H5K5 113 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF43P17038 809 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 CCL1P22362 96 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 CD38P28907 300 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 GLP1RP43220 463 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 C14orf28Q4W4Y0 310 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 NSUN5P2Q63ZY6 315 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC25A47Q6Q0C1 308 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 UBAC2Q8NBM4 344 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 CD300LFQ8TDQ1 290 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 TOMM40LQ969M1 308 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 PIGTQ969N2 578 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 RAB33BQ9H082 229 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 PLEKHA2Q9HB19 425 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF160Q9HCG1 818 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 PNRC2Q9NPJ4 139 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 SLC2A4RGQ9NR83 387 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 TUBD1Q9UJT1 453 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 MCTS1Q9ULC4 181 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 STARD10Q9Y365 291 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 BORCS7-ASMTA0A0B4J1R7 106 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 TRAV20A0A0B4J274 112 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 hCG_1809904A0A1W2PP81 198 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 A0A1W2PR64 198 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 A0A1W2PRV1 198 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 TXNL1O43396 289 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 FAHP16930 419 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 SFTPDP35247 375 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 GRB2P62993 217 aaKnown RBP12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 SP6Q3SY56 376 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 ADAM5Q6NVV9 412 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 RSRP1Q9BUV0 290 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 LUZP4Q9P127 313 aa12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 COL5A1P20908 1838 aaPredicted RBP12.26□□□□□ -0.45
VPS9D1-202ENST00000561976 A0A1B0GV50 99 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 TRAF3IP2O43734 574 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 IGLV3-19P01714 112 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 CTSDP07339 412 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 TMEM225BP0DP42 221 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 PRF1P14222 555 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 AGAP20933 346 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 THBS4P35443 961 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ECI1P42126 302 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 GUCA1AP43080 201 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 FHITP49789 147 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 SMAD4Q13485 552 aaKnown RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ARL6IP1Q15041 203 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 FAM24BQ8N5W8 94 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 LYPD6BQ8NI32 183 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 MRPL38Q96DV4 380 aaKnown RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 BSCL2Q96G97 398 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 MRGPRX4Q96LA9 322 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 KCNIP3Q9Y2W7 256 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 CRYM-AS1A6NIL9 109 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 FOXI3A8MTJ6 420 aaPredicted RBP12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF814B7Z6K7 855 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 UMAD1C9J7I0 102 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 DIRAS3O95661 229 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ARG1P05089 322 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 RAB5AP20339 215 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ACKR3P25106 362 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 OR2B8PP59922 312 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 UBE2V2Q15819 145 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 LILRB2Q8N423 598 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 APCDD1LQ8NCL9 501 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 PLPP5Q8NEB5 264 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 STT3BQ8TCJ2 826 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 METTL7AQ9H8H3 244 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 ASXL3Q9C0F0 2248 aa12.25□□□□□ -0.45
VPS9D1-202ENST00000561976 TRBV11-1A0A0K0K1C0 115 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 E5RGE8 158 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 XRCC2O43543 280 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 NQO2P16083 231 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF84P51523 738 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 PIGPP57054 158 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 PLPPR5Q32ZL2 321 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ABCA11PQ4W5N1 156 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 PLXDC1Q8IUK5 500 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 LYZL4Q96KX0 146 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 FGF21Q9NSA1 209 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 NSG2Q9Y328 171 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 FBXO7Q9Y3I1 522 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 RTTNQ86VV8 2226 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 MED19A0JLT2 244 aaPredicted RBP12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF850A8MQ14 1090 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 RAMP1O60894 148 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 C1QL1O75973 258 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 ZNF205O95201 554 aa12.24□□□□□ -0.45
VPS9D1-202ENST00000561976 MBPP02686 304 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms