RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 BORCS8Q96FH0 119 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 FAHD2AQ96GK7 314 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
SMG1-205ENST00000561947 NOP16Q9Y3C1 178 aaKnown RBP8.52□□□□□ -1.05
SMG1-205ENST00000561947 A0A096LPE4 126 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 A0A1W2PPZ6 126 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 L7N2F9 121 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 M0R233 179 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 AMY2BP19961 511 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 FOXG1P55316 489 aaPredicted RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 SEC61A1P61619 476 aaKnown RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 RSU1Q15404 277 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 RTL6Q6ICC9 239 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 LPCAT3Q6P1A2 487 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 COLCA1Q6ZS62 124 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 MCEMP1Q8IX19 187 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 OR5M8Q8NGP6 311 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TERB2Q8NHR7 220 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 DEFB127Q9H1M4 99 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 LDAHQ9H6V9 325 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 ZNF552Q9H707 407 aaPredicted RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 ZNF816-ZNF321PA0A0X1KG74 233 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 C9orf170A2RU37 121 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TPD52L2O43399 206 aaKnown RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 SPRY1O43609 319 aaPredicted RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 ANGPTL7O43827 346 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 HTR3BO95264 441 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 COX5BP10606 129 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 GABRR1P24046 479 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TAS2R31P59538 309 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TAS2R46P59540 309 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 IKZF1Q13422 519 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 ASCL4Q6XD76 172 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 NUFIP2Q7Z417 695 aaKnown RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 VASH2Q86V25 355 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TMEM178AQ8NBL3 297 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 ADAD2Q8NCV1 583 aaKnown RBP8.51□□□□□ -1.05
SMG1-205ENST00000561947 MARCH1Q8TCQ1 289 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 TECTBQ96PL2 329 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 ST6GALNAC5Q9BVH7 336 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 KCNN3Q9UGI6 736 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 ZNF318Q5VUA4 2279 aa8.51□□□□□ -1.05
SMG1-205ENST00000561947 FXYD6-FXYD2A0A087WZ82 144 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 TRGV5A0A0B4J1U4 118 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 EFSO43281 561 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 LRP3O75074 770 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 IFNA7P01567 189 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 HLA-HP01893 362 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 CSTBP04080 98 aaKnown RBP8.5□□□□□ -1.05
SMG1-205ENST00000561947 FUT6P51993 359 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 NUBP1P53384 320 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ATP1B3P54709 279 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 SNU13P55769 128 aaKnown RBP8.5□□□□□ -1.05
SMG1-205ENST00000561947 SRSF4Q08170 494 aaKnown RBP8.5□□□□□ -1.05
SMG1-205ENST00000561947 EXOSC2Q13868 293 aaKnown RBP8.5□□□□□ -1.05
SMG1-205ENST00000561947 PLCXD3Q63HM9 321 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 MOB3CQ70IA8 216 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 MITD1Q8WV92 249 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 WDYHV1Q96HA8 205 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 FXYD6Q9H0Q3 95 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ASCL3Q9NQ33 180 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 SPRR3Q9UBC9 169 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 SLC7A11Q9UPY5 501 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ZNF503-AS2A6NEH8 195 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 CEACAM18A8MTB9 384 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ARPC5O15511 151 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 PLATP00750 562 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 AKR1C4P17516 323 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 GMFBP60983 142 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 IL13RA1P78552 427 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 SORDQ00796 357 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 RNFT1Q5M7Z0 435 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 C6orf201Q7Z4U5 140 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 CSNK2A3Q8NEV1 391 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 PIGCQ92535 297 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 PHB2Q99623 299 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ZDHHC11Q9H8X9 412 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 PLEKHJ1Q9NW61 149 aa8.5□□□□□ -1.05
SMG1-205ENST00000561947 ZNF230Q9UIE0 474 aaPredicted RBP8.5□□□□□ -1.05
SMG1-205ENST00000561947 RFPL4AA6NLU0 287 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 RFPL4AL1F8VTS6 287 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 NKX2-8O15522 239 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CD8AP01732 235 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 SERPINA5P05154 406 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 PPP3CBP16298 524 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 HLA-GP17693 338 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OR3A3P47888 321 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OR3A2P47893 321 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 TNFSF10P50591 281 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 CAMK2BQ13554 666 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 NKAPLQ5M9Q1 402 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 SIGIRRQ6IA17 410 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 LIN54Q6MZP7 749 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 TMPRSS7Q7RTY8 843 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 LHFPL1Q86WI0 220 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 TMEM17Q86X19 198 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 OR8H3Q8N146 312 aa8.49□□□□□ -1.05
SMG1-205ENST00000561947 PXT1Q8NFP0 134 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms