RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 C9orf16Q9BUW7 83 aa17.09■□□□□ 0.33
TPM1-232ENST00000561425 SIRPDQ9H106 197 aa17.09■□□□□ 0.33
TPM1-232ENST00000561425 TMEM89A2RUT3 159 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 AKR7A2O43488 359 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 UBA52P62987 128 aaKnown RBP17.08■□□□□ 0.32
TPM1-232ENST00000561425 SLC34A1Q06495 639 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 CLVS2Q5SYC1 327 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 KCTD8Q6ZWB6 473 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 COMMD2Q86X83 199 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 FGFRL1Q8N441 504 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 OR10H4Q8NGA5 316 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 ZNF671Q8TAW3 534 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 TBX15Q96SF7 602 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 IMPAD1Q9NX62 359 aa17.08■□□□□ 0.32
TPM1-232ENST00000561425 RPUSD1Q9UJJ7 312 aaKnown RBP17.08■□□□□ 0.32
TPM1-232ENST00000561425 EXOGQ9Y2C4 368 aaKnown RBP17.08■□□□□ 0.32
TPM1-232ENST00000561425 P2RY10O00398 339 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 NOS1APO75052 506 aaPredicted RBP17.07■□□□□ 0.32
TPM1-232ENST00000561425 RPP14O95059 124 aaKnown RBP17.07■□□□□ 0.32
TPM1-232ENST00000561425 ATP6V1E1P36543 226 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 CDONQ4KMG0 1287 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 DMRTC1Q5HYR2 192 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 FDX2Q6P4F2 183 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 KCTD20Q7Z5Y7 419 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 PRSS35Q8N3Z0 413 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 FAM216BQ8N7L0 139 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 CCDC54Q8NEL0 328 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 OR5T2Q8NGG2 359 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 C8orf46Q8TAG6 207 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 WDFY2Q96P53 400 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 GAFA1Q96PS6 74 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 MS4A7Q9GZW8 240 aaPredicted RBP17.07■□□□□ 0.32
TPM1-232ENST00000561425 RASL12Q9NYN1 266 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 NKX1-2Q9UD57 310 aaPredicted RBP17.07■□□□□ 0.32
TPM1-232ENST00000561425 ZNF222Q9UK12 451 aa17.07■□□□□ 0.32
TPM1-232ENST00000561425 SOX21Q9Y651 276 aaPredicted RBP17.07■□□□□ 0.32
TPM1-232ENST00000561425 TRAV40A0A0B4J280 105 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 PQLC2LA1A4F0 135 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 CLDN34H7C241 214 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 ACAA1P09110 424 aaPredicted RBP17.06■□□□□ 0.32
TPM1-232ENST00000561425 PLCXD3Q63HM9 321 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 RHOXF1Q8NHV9 184 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 RNFT2Q96EX2 444 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 MED30Q96HR3 178 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 CNTD2Q9H8S5 307 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 NLKQ9UBE8 527 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 GTF2A1LQ9UNN4 478 aa17.06■□□□□ 0.32
TPM1-232ENST00000561425 IGKV1D-17A0A075B6S4 117 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 IGHV3OR16-10A0A075B7F0 116 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 OR2AT4A6NND4 320 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 SIGLEC5O15389 551 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 SLC16A6O15403 523 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 NDUFB3O43676 98 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 TOX4O94842 621 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 SFTPBP07988 381 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 GLRA1P23415 457 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 PRTN3P24158 256 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 MPZP25189 248 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 ACTC1P68032 377 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 ACTA1P68133 377 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 DGUOKQ16854 277 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 HAGHLQ6PII5 290 aaPredicted RBP17.05■□□□□ 0.32
TPM1-232ENST00000561425 RBMS3Q6XE24 437 aaKnown RBP17.05■□□□□ 0.32
TPM1-232ENST00000561425 ZBTB49Q6ZSB9 765 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 EGFL6Q8IUX8 553 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 ENTHD1Q8IYW4 607 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 POC1AQ8NBT0 407 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 ST8SIA4Q92187 359 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 DCTN5Q9BTE1 182 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 ZMAT3Q9HA38 289 aaKnown RBP17.05■□□□□ 0.32
TPM1-232ENST00000561425 SNTG1Q9NSN8 517 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 DNAJB11Q9UBS4 358 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 PCDHGB1Q9Y5G3 927 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 GMPPBQ9Y5P6 360 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 KPTNQ9Y664 436 aa17.05■□□□□ 0.32
TPM1-232ENST00000561425 CENPVL3A0A0U1RRI6 287 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 PGA5P0DJD9 388 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 PSG2P11465 335 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 KIR3DL2P43630 455 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 CAV3P56539 151 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 TP53I3Q53FA7 332 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 LRRC10Q5BKY1 277 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 ZNF573Q86YE8 665 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 TMIGD2Q96BF3 282 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 SDSLQ96GA7 329 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 ZNF649Q9BS31 505 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 GPR173Q9NS66 373 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 ACOXLQ9NUZ1 547 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 MRPS18AQ9NVS2 196 aaKnown RBP17.04■□□□□ 0.32
TPM1-232ENST00000561425 FAM118AQ9NWS6 357 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 AASSQ9UDR5 926 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 MAB21L2Q9Y586 359 aa17.04■□□□□ 0.32
TPM1-232ENST00000561425 LOC100130705A0A1B0GUX0 176 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 DNAJC9-AS1A6NH13 148 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 SNTNA6NMZ2 147 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 J3QT63 122 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 CASQ2O14958 399 aaPredicted RBP17.03■□□□□ 0.32
TPM1-232ENST00000561425 MPZL2O60487 215 aa17.03■□□□□ 0.32
TPM1-232ENST00000561425 ISG15P05161 165 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms