RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TMED10P49755 219 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 GBX2P52951 348 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 SLC25A1P53007 311 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 LSM3P62310 102 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 PPP3R1P63098 170 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SCN1BQ07699 218 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 RIPPLY1Q0D2K3 151 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 C17orf67Q0P5P2 114 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 AQP6Q13520 282 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 EXOSC7Q15024 291 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 OXA1LQ15070 435 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 TSC22D1Q15714 1073 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 MAPK14Q16539 360 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 KRTAP27-1Q3LI81 207 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CLEC12AQ5QGZ9 265 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 PDZK1Q5T2W1 519 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CCNJQ5T5M9 372 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 HACD4Q5VWC8 232 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 LIPKQ5VXJ0 399 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OLFML2AQ68BL7 652 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 C11orf71Q6IPW1 123 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SLC30A6Q6NXT4 461 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NIPAL3Q6P499 406 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 PLBD1Q6P4A8 553 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CD200R1LQ6Q8B3 271 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OPN5Q6U736 354 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 ZNF322Q6U7Q0 402 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 STAC2Q6ZMT1 411 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 PLEKHG7Q6ZR37 379 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CREB3L2Q70SY1 520 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CHMP1BQ7LBR1 199 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 COMTD1Q86VU5 262 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NKAIN4Q8IVV8 208 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 DND1Q8IYX4 353 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 SYS1Q8N2H4 156 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 MUC15Q8N387 334 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CADM2Q8N3J6 435 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 C10orf53Q8N6V4 93 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SYT14Q8NB59 555 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 DRAXINQ8NBI3 349 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 SLC37A3Q8NCC5 494 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 FAM71CQ8NEG0 241 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR2T4Q8NH00 348 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR4C3Q8NH37 302 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR6S1Q8NH40 331 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR5W2Q8NH69 310 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 ZNF563Q8TA94 476 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NUBPLQ8TB37 319 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NDNFQ8TB73 568 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NANPQ8TBE9 248 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 PTPMT1Q8WUK0 201 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 TMEM255BQ8WV15 326 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 S100PBPQ96BU1 408 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 TMCO6Q96DC7 493 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SAT2Q96F10 170 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 GRAMD2BQ96HH9 432 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 MED30Q96HR3 178 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SAMD8Q96LT4 415 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OPALINQ96PE5 141 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR5M11Q96RB7 305 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 GPX7Q96SL4 187 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 GPA33Q99795 319 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SLC30A2Q9BRI3 323 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 TBL1XR1Q9BZK7 514 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 C6orf62Q9GZU0 229 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR51E2Q9H255 320 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 OR52D1Q9H346 318 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 EGLN3Q9H6Z9 239 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 ANKRA2Q9H9E1 313 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SEBOXQ9HB31 216 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 PROK2Q9HC23 129 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 EXOSC4Q9NPD3 245 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 NANSQ9NR45 359 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CTPS2Q9NRF8 586 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 NPAP1Q9NZP6 1156 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 CNIH4Q9P003 139 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 ZNF229Q9UJW7 825 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 POU2F3Q9UKI9 436 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 PPIEQ9UNP9 301 aaKnown RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 LRP12Q9Y561 859 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 MMP24Q9Y5R2 645 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 SPIN1Q9Y657 262 aaPredicted RBP2.7□□□□□ -1.98
SPG11-225ENST00000561391 TMEM14AQ9Y6G1 99 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 ABCA13Q86UQ4 5058 aa2.7□□□□□ -1.98
SPG11-225ENST00000561391 STAB2Q8WWQ8 2551 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 PLCE1Q9P212 2302 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 IGKV2D-30A0A075B6S6 120 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 TRAV36DV7A0A075B6V5 113 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 TRAV1-2A0A0B4J238 106 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 WI2-2373I1.2A0A1W2PRP0 233 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CLPSL1A2RUU4 121 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 FABP12A6NFH5 140 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 A6NIZ1 184 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 FAM90A8PA6NJQ4 464 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 A8MVM7 634 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 H7C417 338 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 CDC42EP2O14613 210 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 ABCD4O14678 606 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 TP53I11O14683 189 aa2.69□□□□□ -1.98
SPG11-225ENST00000561391 WNT9BO14905 357 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms