RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CTXN1P60606 82 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RAP1BP61224 184 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 GNG11P61952 73 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 VSNL1P62760 191 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RAP1AP62834 184 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 MXRA7P84157 204 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 SPIBQ01892 262 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 CBX3Q13185 183 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 IL18R1Q13478 541 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 CXorf66Q5JRM2 361 aaPredicted RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 ZNF626Q68DY1 528 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 TEX38Q6PEX7 206 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 CFAP77Q6ZQR2 320 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 GLB1L2Q8IW92 636 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 C11orf53Q8IXP5 236 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 KIRREL3Q8IZU9 778 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 SPATA4Q8NEY3 305 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 OR1M1Q8NGA1 313 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 OR4M1Q8NGD0 313 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 OR6Q1Q8NGQ2 317 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 NFKBIDQ8NI38 313 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 ANGPTL6Q8NI99 470 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 LRRC8CQ8TDW0 803 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 EME1Q96AY2 570 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 ZNF570Q96NI8 536 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RBM14Q96PK6 669 aaKnown RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 RAB3IPQ96QF0 476 aaPredicted RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 COQ7Q99807 217 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 FAM192AQ9GZU8 254 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 HDHD2Q9H0R4 259 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RERGLQ9H628 205 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 TUBA4BQ9H853 241 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 MEPEQ9NQ76 525 aaPredicted RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 ZDHHC18Q9NUE0 388 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 VSX1Q9NZR4 365 aaPredicted RBP4.12□□□□□ -1.75
HERC1-213ENST00000561359 KIAA1456Q9P272 454 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 RPS6KA6Q9UK32 745 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 LRP12Q9Y561 859 aa4.12□□□□□ -1.75
HERC1-213ENST00000561359 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 A0A1W2PPM1 405 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 TRAPPC13A5PLN9 417 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 DPPA5A6NC42 116 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 NUPR2A6NF83 97 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR2AT4A6NND4 320 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 ANKRD30BLA7E2S9 258 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 CCRL2O00421 344 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 COPEO14579 308 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 AKR7A2O43488 359 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 SCAF4O95104 1147 aaKnown RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 BRI3O95415 125 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 FAM107AO95990 144 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 MT-ND1P03886 318 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 ALDOCP09972 364 aaKnown RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 ACSM4P0C7M7 580 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR8U8P0C7N1 319 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 IGHV1-8P0DP01 117 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 CPEP16870 476 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 AQP1P29972 269 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 BRS3P32247 399 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 GNALP38405 381 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 CDX1P47902 265 aaPredicted RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 ARHGDIBP52566 201 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 UFM1P61960 85 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 LSM6P62312 80 aaKnown RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 ZNF92Q03936 586 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 FHL3Q13643 280 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 PCLAFQ15004 111 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 RGNQ15493 299 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 RSPO1Q2MKA7 263 aaPredicted RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 GTDC1Q4AE62 458 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 ALG10Q5BKT4 473 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 KIAA2026Q5HYC2 2103 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 ENTPD8Q5MY95 495 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 MINOS1Q5TGZ0 78 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
HERC1-213ENST00000561359 REEP3Q6NUK4 255 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 SLC2A7Q6PXP3 512 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 TMPRSS11FQ6ZWK6 438 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 WDR86Q86TI4 376 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 NAA40Q86UY6 237 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 LYPD6Q86Y78 171 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 SLC15A3Q8IY34 581 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 DPP10Q8N608 796 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 DRAM1Q8N682 238 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 GJC3Q8NFK1 279 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR11H1Q8NG94 326 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR11H6Q8NGC7 330 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR56B2PQ8NGI1 322 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR2T27Q8NH04 317 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 OR2AE1Q8NHA4 323 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 PFN4Q8NHR9 129 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 VPS33AQ96AX1 596 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 SGTBQ96EQ0 304 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 MPP4Q96JB8 637 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 ZBTB18Q99592 522 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 CGREF1Q99674 301 aa4.11□□□□□ -1.75
HERC1-213ENST00000561359 PITX2Q99697 317 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms