RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	IQCF1	Q8N6M8	205 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	OR8B12	Q8NGG6	310 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	HPSE2	Q8WWQ2	592 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	SDSL	Q96GA7	329 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	LYZL4	Q96KX0	146 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	LRGUK	Q96M69	825 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	NPFFR1	Q9GZQ6	430 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	OR51I2	Q9H344	312 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	ZNF556	Q9HAH1	456 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	LAMP5	Q9UJQ1	280 aa		11.3	□□□□□ -0.6
IDH3A-222	ENST00000561279	IGKV1D-17	A0A075B6S4	117 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279		A0A0U1RQV5	110 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	ARRDC5	A6NEK1	342 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279		B2RBV5	119 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	SLC1A7	O00341	560 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	GNGT2	O14610	69 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	SELENOF	O60613	162 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	RHBDL1	O75783	438 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	CST1	P01037	141 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	TFF1	P04155	84 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	RAP2A	P10114	183 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	RPS7	P62081	194 aa	Known RBP	11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	RPL31	P62899	125 aa	Known RBP	11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	EMX1	Q04741	257 aa	Predicted RBP	11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	RIPPLY1	Q0D2K3	151 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	GINS1	Q14691	196 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	CEP78	Q5JTW2	689 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	DEGS2	Q6QHC5	323 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	MOB3C	Q70IA8	216 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	COMMD2	Q86X83	199 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	ZNF561	Q8N587	486 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	OR5K1	Q8NHB7	308 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	PPP1R35	Q8TAP8	253 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	AQP3	Q92482	292 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	PPP1R14A	Q96A00	147 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	MRO	Q9BYG7	248 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	YY1AP1	Q9H869	796 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	ELL3	Q9HB65	397 aa	Predicted RBP	11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	VNN3	Q9NY84	501 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	LRP12	Q9Y561	859 aa		11.29	□□□□□ -0.6
IDH3A-222	ENST00000561279	TMEM269	A0A1B0GVZ9	245 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	ATP8B1	O43520	1251 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	MTRF1	O75570	445 aa	Known RBP	11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	ALOX5AP	P20292	161 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	SMIM21	Q3B7S5	101 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	BEAN1	Q3B7T3	259 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	ZBTB37	Q5TC79	503 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	HCP5	Q6MZN7	132 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	HAGHL	Q6PII5	290 aa	Predicted RBP	11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	CPO	Q8IVL8	374 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	MKX	Q8IYA7	352 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	CFHR4	Q92496	578 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	RORB	Q92753	470 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	FGF23	Q9GZV9	251 aa	Predicted RBP	11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	ZNF222	Q9UK12	451 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	FOXJ3	Q9UPW0	622 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	SIGLEC9	Q9Y336	463 aa		11.28	□□□□□ -0.6
IDH3A-222	ENST00000561279	RFPL4A	A6NLU0	287 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	RFPL4AL1	F8VTS6	287 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279		G3V4G9	280 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	XPNPEP2	O43895	674 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ZNF254	O75437	659 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	OSM	P13725	252 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	HOXB6	P17509	224 aa	Known RBP	11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	PRDX2	P32119	198 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ERVFRD-1	P60508	538 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	FAM189A2	Q15884	450 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ZNF684	Q5T5D7	378 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	LCN1P1	Q5VSP4	162 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	PLCXD3	Q63HM9	321 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ACP7	Q6ZNF0	438 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	PIGW	Q7Z7B1	504 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	CALHM1	Q8IU99	346 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	KLHDC1	Q8N7A1	406 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	C11orf44	Q8N8P7	122 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	OR4S1	Q8NGB4	309 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	OR2T27	Q8NH04	317 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	C17orf50	Q8WW18	174 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	NSL1	Q96IY1	281 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	CHID1	Q9BWS9	393 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	CDCA4	Q9BXL8	241 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	YIPF3	Q9GZM5	350 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	C1orf21	Q9H246	121 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	C19orf12	Q9NSK7	152 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	USE1	Q9NZ43	259 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ENPP5	Q9UJA9	477 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	POLDIP2	Q9Y2S7	368 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	ZNF281	Q9Y2X9	895 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	TMEM14A	Q9Y6G1	99 aa		11.27	□□□□□ -0.61
IDH3A-222	ENST00000561279	NRAS	P01111	189 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	VSIG10L2	P0DP72	767 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	ACTR3	P61158	418 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	CDK5	Q00535	292 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	MS4A2	Q01362	244 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	KPRP	Q5T749	579 aa	Predicted RBP	11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	SAMD5	Q5TGI4	173 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	TMEM200B	Q69YZ2	307 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	CRIP3	Q6Q6R5	217 aa		11.26	□□□□□ -0.61
IDH3A-222	ENST00000561279	ZNF573	Q86YE8	665 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms