RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 FAM76BQ5HYJ3 339 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 CLVS2Q5SYC1 327 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 TTC23Q5W5X9 447 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 RBMS3Q6XE24 437 aaKnown RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 MOB3CQ70IA8 216 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 PACRGLQ8N7B6 248 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 HAVCR2Q8TDQ0 301 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 C10orf35Q96D05 121 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 RNFT2Q96EX2 444 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 TTTY10Q9BZA0 68 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 VCXQ9H320 206 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 SMPD3Q9NY59 655 aaPredicted RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 MRM2Q9UI43 246 aaKnown RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
LMX1B-204ENST00000561065 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
LMX1B-204ENST00000561065 IRGMA1A4Y4 181 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 DVL1O14640 695 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 SLC16A6O15403 523 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 SYT7O43581 403 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 TTRP02766 147 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 MRPL28Q13084 256 aaKnown RBP13.2□□□□□ -0.3
LMX1B-204ENST00000561065 DEFB112Q30KQ8 113 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 WDR38Q5JTN6 314 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 TMEM244Q5VVB8 128 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 PLCXD3Q63HM9 321 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 FAM216BQ8N7L0 139 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 C3orf56Q8N813 242 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 PNLDC1Q8NA58 520 aaKnown RBP13.2□□□□□ -0.3
LMX1B-204ENST00000561065 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 MED30Q96HR3 178 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 PCGF1Q9BSM1 259 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 SIRPDQ9H106 197 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 NEK6Q9HC98 313 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 INPP5EQ9NRR6 644 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 KAAG1Q9UBP8 84 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 GNG8Q9UK08 70 aa13.2□□□□□ -0.3
LMX1B-204ENST00000561065 SRRM5B3KS81 715 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 ZNF879B4DU55 563 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 ZNF732B4DXR9 585 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 CLDN34H7C241 214 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 TMPRSS2O15393 492 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 TFF1P04155 84 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 UBCP0CG48 685 aaKnown RBP13.19□□□□□ -0.3
LMX1B-204ENST00000561065 SELLP14151 372 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 BPIFB3P59826 476 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 RAB40BQ12829 278 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 MED21Q13503 144 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 SETD9Q8NE22 299 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 DMRTB1Q96MA1 342 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 CCL13Q99616 98 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 SLC29A1Q99808 456 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 WDR13Q9H1Z4 485 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 ZMAT3Q9HA38 289 aaKnown RBP13.19□□□□□ -0.3
LMX1B-204ENST00000561065 RASL12Q9NYN1 266 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 SLC22A13Q9Y226 551 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 POLDIP2Q9Y2S7 368 aa13.19□□□□□ -0.3
LMX1B-204ENST00000561065 NDUFB3O43676 98 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 GATBO75879 557 aaKnown RBP13.18□□□□□ -0.3
LMX1B-204ENST00000561065 IGLV3-1P01715 115 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 GPM6AP51674 278 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 MFGE8Q08431 387 aaPredicted RBP13.18□□□□□ -0.3
LMX1B-204ENST00000561065 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 STUMQ69YW2 141 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 BTN2A1Q7KYR7 527 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 SCCPDHQ8NBX0 429 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 ST8SIA4Q92187 359 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 RPL3LQ92901 407 aaKnown RBP13.18□□□□□ -0.3
LMX1B-204ENST00000561065 UBE2FQ969M7 185 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 WDFY2Q96P53 400 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 PRDM13Q9H4Q3 707 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 EXOGQ9Y2C4 368 aaKnown RBP13.18□□□□□ -0.3
LMX1B-204ENST00000561065 V9GYS6 101 aa13.18□□□□□ -0.3
LMX1B-204ENST00000561065 CENPVL3A0A0U1RRI6 287 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 NKX6-3A6NJ46 265 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 P2RY10O00398 339 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 HOXA3O43365 443 aaPredicted RBP13.17□□□□□ -0.3
LMX1B-204ENST00000561065 SRSF10O75494 262 aaKnown RBP13.17□□□□□ -0.3
LMX1B-204ENST00000561065 TOX4O94842 621 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 HTR1AP08908 422 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 FAHP16930 419 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 GLRA1P23415 457 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 GMFBP60983 142 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 LRRC10Q5BKY1 277 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 DMRTC1Q5HYR2 192 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 CEP78Q5JTW2 689 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 GPR157Q5UAW9 335 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 RORBQ92753 470 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 TMIGD2Q96BF3 282 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 RPUSD1Q9UJJ7 312 aaKnown RBP13.17□□□□□ -0.3
LMX1B-204ENST00000561065 PKD1L1Q8TDX9 2849 aa13.17□□□□□ -0.3
LMX1B-204ENST00000561065 E9PQ18 207 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 MAGEB4O15481 346 aaPredicted RBP13.16□□□□□ -0.3
LMX1B-204ENST00000561065 APOL3O95236 402 aa13.16□□□□□ -0.3
LMX1B-204ENST00000561065 OCM2P0CE71 109 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms