RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 HAVCR1Q96D42 359 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CEP19Q96LK0 163 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 SORCS2Q96PQ0 1159 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 PAPOLGQ9BWT3 736 aaKnown RBP10.06□□□□□ -0.8
LDLR-212ENST00000560467 OR2J1Q9GZK6 312 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 MMP27Q9H306 513 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 RNF167Q9H6Y7 350 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 PCDHB16Q9NRJ7 776 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CYSLTR2Q9NS75 346 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 TMEM160Q9NX00 188 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 TAS2R4Q9NYW5 299 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 LPAR3Q9UBY5 353 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 DUSP13Q9UII6 198 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 ADAM30Q9UKF2 790 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 CMAHPQ9Y471 501 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 MPC1Q9Y5U8 109 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 A3GALT2U3KPV4 340 aa10.06□□□□□ -0.8
LDLR-212ENST00000560467 hCG_38984A0A1B0GV85 526 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 ALX3O95076 343 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 CYB5AP00167 134 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 CST4P01036 141 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 IGLV3-1P01715 115 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 FAHP16930 419 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 SRD5A1P18405 259 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 ATF1P18846 271 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 FUT6P51993 359 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 ATP1B3P54709 279 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 KLF3P57682 345 aaPredicted RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 HLXQ14774 488 aaPredicted RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 OR8B8Q15620 311 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 FAM189A2Q15884 450 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 RAB11BQ15907 218 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 SPATA46Q5T0L3 261 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 FAM27D1Q5T7N8 215 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 PLCXD3Q63HM9 321 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 FBXL14Q8N1E6 418 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 SPERTQ8NA61 448 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 NUP37Q8NFH4 326 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 OR56B2PQ8NGI1 322 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 OR13C9Q8NGT0 318 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 DYNC2LI1Q8TCX1 351 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 KLF14Q8TD94 323 aaPredicted RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 MICU1Q9BPX6 476 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 CHST5Q9GZS9 411 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 C6orf62Q9GZU0 229 aaPredicted RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 CHODLQ9H9P2 273 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 TMEM100Q9NV29 134 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 MRPL15Q9P015 296 aaKnown RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 AK6Q9Y3D8 172 aaKnown RBP10.05□□□□□ -0.8
LDLR-212ENST00000560467 PEX16Q9Y5Y5 336 aa10.05□□□□□ -0.8
LDLR-212ENST00000560467 A6NIN4 97 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 ATP6V1G2-DDX39BF2Z307 99 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 H7C417 338 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 PIN1P1O15428 100 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 RGS5O15539 181 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 GMDSO60547 372 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 LMX1BO60663 402 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 ALDOBP05062 364 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 USF1P22415 310 aaPredicted RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 ZNF93P35789 620 aaPredicted RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 MAGEB1P43366 347 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 RBP2P50120 134 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 MTCP1P56278 107 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 CEP78Q5JTW2 689 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 DDI2Q5TDH0 399 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 MBNL2Q5VZF2 373 aaKnown RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 OR2T2Q6IF00 324 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 SFXN4Q6P4A7 337 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 VHLLQ6RSH7 139 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 Q6ZSR3 168 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 ZDHHC23Q8IYP9 409 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 OR6M1Q8NGM8 313 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 OR13G1Q8NGZ3 307 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 PHF21AQ96BD5 680 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 BORCS8Q96FH0 119 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 TSC22D3Q99576 134 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 UQCC2Q9BRT2 126 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 PPIL3Q9H2H8 161 aaKnown RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 C14orf119Q9NWQ9 140 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 ABRACLQ9P1F3 81 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 CGGBP1Q9UFW8 167 aaPredicted RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 DAPK2Q9UIK4 370 aa10.04□□□□□ -0.8
LDLR-212ENST00000560467 FBXO9Q9UK97 447 aaPredicted RBP10.04□□□□□ -0.8
LDLR-212ENST00000560467 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 FAM230AA0A1W2PPH8 454 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 IFITM5A6NNB3 132 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 ZNF850A8MQ14 1090 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 AIPO00170 330 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 CLPXO76031 633 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 BMP4P12644 408 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 IGFBP3P17936 291 aaPredicted RBP10.03□□□□□ -0.8
LDLR-212ENST00000560467 TNFSF4P23510 183 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 CALCRP30988 508 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 TGFBR1P36897 503 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 TALDO1P37837 337 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 EFNA4P52798 201 aa10.03□□□□□ -0.8
LDLR-212ENST00000560467 PRDX4Q13162 271 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms