RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 HS3ST5Q8IZT8 346 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNRF1Q8ND25 227 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 SDR9C7Q8NEX9 313 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 OR5K1Q8NHB7 308 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 FANK1Q8TC84 345 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 RPS4Y2Q8TD47 263 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 OR52D1Q9H346 318 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 OPA3Q9H6K4 179 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 EGLN3Q9H6Z9 239 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 RPRD1BQ9NQG5 326 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 N6AMT1Q9Y5N5 214 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 U3KQV3 271 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 KIAA2026Q5HYC2 2103 aa10.27□□□□□ -0.77
RABGGTA-213ENST00000560127 PLECQ15149 4684 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 F2RL2O00254 374 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 RHBDL1O75783 438 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 CLIC3O95833 236 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 GASTP01350 101 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 HLA-DQA2P01906 255 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 NOS3P29474 1203 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 GABRA2P47869 451 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 PRKXP51817 358 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 SMIM11AP58511 58 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 TSPAN31Q12999 210 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 FAM98BQ52LJ0 330 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 SMARCD3Q6STE5 483 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 ETV3LQ6ZN32 361 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 RRM2BQ7LG56 351 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 CENPVQ7Z7K6 275 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 MRPL41Q8IXM3 137 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 CYB561A3Q8NBI2 242 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 RPL3LQ92901 407 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 ERMAPQ96PL5 475 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 FN3KQ9H479 309 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 ABCB10Q9NRK6 738 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF222Q9UK12 451 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 PITPNC1Q9UKF7 332 aa10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 LSM4Q9Y4Z0 139 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-213ENST00000560127 IGKV1D-17A0A075B6S4 117 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 OR6C68A6NDL8 312 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 OR2AT4A6NND4 320 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 H0YHG0 523 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 XRCC2O43543 280 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 FKBP6O75344 327 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 KRT36O76013 467 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 ZFPL1O95159 310 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 RENP00797 406 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 HIST1H1CP16403 213 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 JUNBP17275 347 aaPredicted RBP10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 SLC25A1P53007 311 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 C10orf99Q6UWK7 81 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 SPATA24Q86W54 205 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 AQP11Q8NBQ7 271 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 TMEM185AQ8NFB2 350 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 OR4Q3Q8NH05 313 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 OR4K13Q8NH42 304 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 LRGUKQ96M69 825 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 ASCL2Q99929 193 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 NIPSNAP1Q9BPW8 284 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 KCNG2Q9UJ96 466 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 RHBDD3Q9Y3P4 386 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 SAMHD1Q9Y3Z3 626 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 CDH10Q9Y6N8 788 aa10.25□□□□□ -0.77
RABGGTA-213ENST00000560127 hCG_38984A0A1B0GV85 526 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 CCNB2O95067 398 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 PSG2P11465 335 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 CCL3L1P16619 93 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 GNALP38405 381 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 DGCR2P98153 550 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 SSX2Q16385 188 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 MICAQ29983 383 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 KLHL12Q53G59 568 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 TMEM200BQ69YZ2 307 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF782Q6ZMW2 699 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 GNPDA2Q8TDQ7 276 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 SGK3Q96BR1 496 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 MALSU1Q96EH3 234 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 KCNJ15Q99712 375 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 MICU1Q9BPX6 476 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 COPS4Q9BT78 406 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 PAPOLGQ9BWT3 736 aaKnown RBP10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 DGCR6LQ9BY27 220 aa10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 FGF23Q9GZV9 251 aaPredicted RBP10.24□□□□□ -0.77
RABGGTA-213ENST00000560127 TVP23AA6NH52 213 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ODF3BA8MYP8 253 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ARPC3O15145 178 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 TBX1O43435 398 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ATP5HO75947 161 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 SOX14O95416 240 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 CST1P01037 141 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 ZNF823P16415 610 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 DYNLT3P51808 116 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 RPL31P62899 125 aaKnown RBP10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 CBX1P83916 185 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 IL5RAQ01344 420 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 FAM76BQ5HYJ3 339 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 KHDC1LQ5JSQ8 128 aa10.23□□□□□ -0.77
RABGGTA-213ENST00000560127 LYPD4Q6UWN0 246 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms