RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 PATZ1Q9HBE1 687 aaKnown RBP14.09□□□□□ -0.15
RPL28-209ENST00000560055 TRIM36Q9NQ86 728 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 UBAP1Q9NZ09 502 aa14.09□□□□□ -0.15
RPL28-209ENST00000560055 SRRM5B3KS81 715 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 B4DSR2 109 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 LGALS8O00214 317 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 TNFRSF13BO14836 293 aaPredicted RBP14.08□□□□□ -0.16
RPL28-209ENST00000560055 DENRO43583 198 aaKnown RBP14.08□□□□□ -0.16
RPL28-209ENST00000560055 CD80P33681 288 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 WNT4P56705 351 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 IRF3Q14653 427 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 TEX36Q5VZQ5 186 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 C19orf18Q8NEA5 215 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 MYDGFQ969H8 173 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 FGGYQ96C11 551 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 SMIM19Q96E16 107 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 ERVK-18Q9QC07 812 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 ERGIC3Q9Y282 383 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 TPRKBQ9Y3C4 175 aa14.08□□□□□ -0.16
RPL28-209ENST00000560055 IGKV1-9A0A0C4DH69 117 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 OOEPA6NGQ2 149 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 C3orf80F5H4A9 247 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 MYL12BO14950 172 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 RHBDL1O75783 438 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 TGFAP01135 160 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 MSMBP08118 114 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 CPT2P23786 658 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 SFRP4Q6FHJ7 346 aaPredicted RBP14.07□□□□□ -0.16
RPL28-209ENST00000560055 FAM166AQ6J272 317 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 DCDC5Q6ZRR9 648 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 OR13C3Q8NGS6 347 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 AQP3Q92482 292 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 PGLYRP3Q96LB9 341 aa14.07□□□□□ -0.16
RPL28-209ENST00000560055 LSM2Q9Y333 95 aaKnown RBP14.07□□□□□ -0.16
RPL28-209ENST00000560055 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 A8MV72 311 aaPredicted RBP14.06□□□□□ -0.16
RPL28-209ENST00000560055 INAFM1C9JVW0 142 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 SERPINA3P01011 423 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 WNT2P09544 360 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 MPZP25189 248 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 DVL1P1P54792 670 aaPredicted RBP14.06□□□□□ -0.16
RPL28-209ENST00000560055 TAS2R43P59537 309 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 KCNJ8Q15842 424 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 RBM48Q5RL73 367 aaKnown RBP14.06□□□□□ -0.16
RPL28-209ENST00000560055 HAGHLQ6PII5 290 aaPredicted RBP14.06□□□□□ -0.16
RPL28-209ENST00000560055 FAM90A1Q86YD7 464 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 ZNF573Q86YE8 665 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 PARP16Q8N5Y8 322 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 BOLLQ8N9W6 283 aaKnown RBP14.06□□□□□ -0.16
RPL28-209ENST00000560055 DEFB108BQ8NET1 73 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 OR51F2Q8NH61 342 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 MND1Q9BWT6 205 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 Q9H521 79 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 MIOXQ9UGB7 285 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 PCDHB10Q9UN67 800 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 SLC7A11Q9UPY5 501 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 DNHD1Q96M86 4753 aa14.06□□□□□ -0.16
RPL28-209ENST00000560055 IGKV1-27A0A075B6S5 117 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 A8MXK9 166 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 J3QT63 122 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 PLPP2O43688 288 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 ALX3O95076 343 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 MT-ND2P03891 347 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 RPS2P15880 293 aaKnown RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 MUC1P15941 1255 aaPredicted RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 ZNF20P17024 532 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 ATF1P18846 271 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 HAAOP46952 286 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 FUT6P51993 359 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 SEC61A1P61619 476 aaKnown RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 BDH1Q02338 343 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 ACSM1Q08AH1 577 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 CNN3Q15417 329 aaKnown RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 ASPHD2Q6ICH7 369 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 LYPD2Q6UXB3 125 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 PRSS48Q7RTY5 328 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 CALHM1Q8IU99 346 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 ZFP41Q8N8Y5 198 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 DNAAF1Q8NEP3 725 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 TRMT10AQ8TBZ6 339 aaKnown RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 GPR148Q8TDV2 347 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 GHSRQ92847 366 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 TMEM186Q96B77 213 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 SPSB1Q96BD6 273 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 C12orf43Q96C57 262 aaKnown RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 WDR13Q9H1Z4 485 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 RASSF4Q9H2L5 321 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 TMEM160Q9NX00 188 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 DHDHQ9UQ10 334 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 ZNF281Q9Y2X9 895 aa14.05□□□□□ -0.16
RPL28-209ENST00000560055 POLR3KQ9Y2Y1 108 aaPredicted RBP14.05□□□□□ -0.16
RPL28-209ENST00000560055 KIAA1324LA8MWY0 1029 aaPredicted RBP14.04□□□□□ -0.16
RPL28-209ENST00000560055 AKR7A2O43488 359 aa14.04□□□□□ -0.16
RPL28-209ENST00000560055 RGS10O43665 173 aa14.04□□□□□ -0.16
RPL28-209ENST00000560055 NDUFA2O43678 99 aa14.04□□□□□ -0.16
RPL28-209ENST00000560055 NOS1APO75052 506 aaPredicted RBP14.04□□□□□ -0.16
RPL28-209ENST00000560055 CD1AP06126 327 aa14.04□□□□□ -0.16
RPL28-209ENST00000560055 ACAA1P09110 424 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms