RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 HAAOP46952 286 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 ALDH3B2P48448 385 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 BLMHQ13867 455 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 MPPED2Q15777 294 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 GPR107Q5VW38 600 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 CD200R1LQ6Q8B3 271 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 ANGPTL5Q86XS5 388 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 BOLLQ8N9W6 283 aaKnown RBP12.14□□□□□ -0.47
SMAD6-204ENST00000559931 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 RPL3LQ92901 407 aaKnown RBP12.14□□□□□ -0.47
SMAD6-204ENST00000559931 SPACA5Q96QH8 159 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 FUNDC2Q9BWH2 189 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 GSX2Q9BZM3 304 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
SMAD6-204ENST00000559931 GCM1Q9NP62 436 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 C1orf123Q9NWV4 160 aa12.14□□□□□ -0.47
SMAD6-204ENST00000559931 TXNL4BQ9NX01 149 aaKnown RBP12.14□□□□□ -0.47
SMAD6-204ENST00000559931 LRP5LA4QPB2 252 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 MEGF11A6BM72 1044 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 CDIPTO14735 213 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 FSTP19883 344 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 POU3F4P49335 361 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 LSM3P62310 102 aaKnown RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF154Q13106 437 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ASPHD2Q6ICH7 369 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 HAGHLQ6PII5 290 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 WDR86Q86TI4 376 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 JAGN1Q8N5M9 183 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 OR52N4Q8NGI2 321 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF420Q8TAQ5 688 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF671Q8TAW3 534 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ERGIC1Q969X5 290 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 RFT1Q96AA3 541 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 MBD6Q96DN6 1003 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 KCTD7Q96MP8 289 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 FGF23Q9GZV9 251 aaPredicted RBP12.13□□□□□ -0.47
SMAD6-204ENST00000559931 OR51I2Q9H344 312 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 DLL4Q9NR61 685 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 SNTG1Q9NSN8 517 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 ITGB1BP2Q9UKP3 347 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 AKAP9Q99996 3911 aa12.13□□□□□ -0.47
SMAD6-204ENST00000559931 CYB5AP00167 134 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 ALDOBP05062 364 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 TMEM225BP0DP42 221 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 PAX1P15863 534 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 FGF9P31371 208 aaPredicted RBP12.12□□□□□ -0.47
SMAD6-204ENST00000559931 GATA4P43694 442 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 KISS1Q15726 138 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 FAM76BQ5HYJ3 339 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF529Q6P280 563 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 PEG10Q86TG7 708 aaKnown RBP12.12□□□□□ -0.47
SMAD6-204ENST00000559931 HPS1Q92902 700 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 YIPF5Q969M3 257 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 RNF7Q9UBF6 113 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 CSMD1Q96PZ7 3565 aa12.12□□□□□ -0.47
SMAD6-204ENST00000559931 PRRC2AP48634 2157 aaKnown RBP12.12□□□□□ -0.47
SMAD6-204ENST00000559931 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 PDCD5O14737 125 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF93P35789 620 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 PMELP40967 661 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 PDLIM4P50479 330 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 GMFBP60983 142 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 MRPS11P82912 194 aaKnown RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 GLT8D1Q68CQ7 371 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 TGIF2LYQ8IUE0 185 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 CLVS1Q8IUQ0 354 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 C11orf53Q8IXP5 236 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 MKXQ8IYA7 352 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 C1orf87Q8N0U7 546 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 LRRC75A-AS1Q8N1F1 130 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 PNLDC1Q8NA58 520 aaKnown RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 OR5D18Q8NGL1 313 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 LRRC29Q8WV35 223 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 S100A13Q99584 98 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 FAM192AQ9GZU8 254 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 ELL3Q9HB65 397 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 MYOZ1Q9NP98 299 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 POLDIP2Q9Y2S7 368 aa12.11□□□□□ -0.47
SMAD6-204ENST00000559931 AK6Q9Y3D8 172 aaKnown RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-204ENST00000559931 TRAV1-2A0A0B4J238 106 aa12.1□□□□□ -0.47
SMAD6-204ENST00000559931 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
SMAD6-204ENST00000559931 J3QT63 122 aa12.1□□□□□ -0.47
SMAD6-204ENST00000559931 PPIHO43447 177 aaKnown RBP12.1□□□□□ -0.47
SMAD6-204ENST00000559931 SPRY1O43609 319 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms