RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SMARCD3Q6STE5 483 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 CD300LDQ6UXZ3 194 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 NLRC3Q7RTR2 1065 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 FAM90A1Q86YD7 464 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 HS3ST5Q8IZT8 346 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 C1orf87Q8N0U7 546 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 TMEM86BQ8N661 226 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 MINDY2Q8NBR6 621 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 LY6G5BQ8NDX9 201 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 OR10G2Q8NGC3 310 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 OR4F5Q8NH21 305 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 OR4K13Q8NH42 304 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 OR52J3Q8NH60 311 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 OR2AE1Q8NHA4 323 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 TBC1D15Q8TC07 691 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ERGIC1Q969X5 290 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ANAPC16Q96DE5 110 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 WDFY2Q96P53 400 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ERMAPQ96PL5 475 aaPredicted RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 FEVQ99581 238 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 FUNDC2Q9BWH2 189 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 HCAR1Q9BXC0 346 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 DGCR6LQ9BY27 220 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 WDR12Q9GZL7 423 aaKnown RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 OR52D1Q9H346 318 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 RIBC2Q9H4K1 309 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 BEX1Q9HBH7 125 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 HMG20AQ9NP66 347 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ACOT13Q9NPJ3 140 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 RPRD1BQ9NQG5 326 aaKnown RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 FKBP14Q9NWM8 211 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 ETAA1Q9NY74 926 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 VNN3Q9NY84 501 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 RNF7Q9UBF6 113 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 WARS2Q9UGM6 360 aaKnown RBP4.77□□□□□ -1.65
USP3-215ENST00000559771 PSORS1C1Q9UIG5 152 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 POMT1Q9Y6A1 747 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
USP3-215ENST00000559771 IGHV3OR15-7A0A075B7D8 119 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 A0A1B0GUS0 222 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 OOEPA6NGQ2 149 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 SNTNA6NMZ2 147 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 M0R135 149 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 LGALS8O00214 317 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 P2RY10O00398 339 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 DVL1O14640 695 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ADAM20O43506 726 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 OR10H3O60404 316 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 GPR137BO60478 399 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 GMDSO60547 372 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 WBP4O75554 376 aaKnown RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 GADD45GO95257 159 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 GYPAP02724 150 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 LCATP04180 440 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 CDK1P06493 297 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PYCR1P32322 319 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 CENPAP49450 140 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 NPY4RP50391 375 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 SNRPGP62308 76 aaKnown RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 ARF6P62330 175 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 SPIBQ01892 262 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PRB3Q04118 309 aaPredicted RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 ECH1Q13011 328 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ZNF846Q147U1 533 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 OR8G1Q15617 311 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 CTF1Q16619 201 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PCK2Q16822 640 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 KLHL12Q53G59 568 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 FGD3Q5JSP0 725 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 MEDAGQ5VYS4 303 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 TEX36Q5VZQ5 186 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ZNF620Q6ZNG0 422 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 GDPGP1Q6ZNW5 385 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 Q6ZSV7 163 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PGAP1Q75T13 922 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 RRM2BQ7LG56 351 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PRSS45Q7RTY3 260 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 LDLRAD3Q86YD5 345 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 PDZD9Q8IXQ8 264 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ENTHD1Q8IYW4 607 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 Q8N7P7 452 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ZSCAN4Q8NAM6 433 aaPredicted RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 SDR9C7Q8NEX9 313 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 OR8D4Q8NGM9 314 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 FAM81AQ8TBF8 368 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 FANK1Q8TC84 345 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 DYRK2Q92630 601 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 LHX4Q969G2 390 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 YIPF6Q96EC8 236 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 SEH1LQ96EE3 360 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ZNF799Q96GE5 643 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 FAM71F1Q96KD3 344 aaPredicted RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 TECTBQ96PL2 329 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 COPS4Q9BT78 406 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 ADAT1Q9BUB4 502 aaKnown RBP4.76□□□□□ -1.65
USP3-215ENST00000559771 CDCA4Q9BXL8 241 aa4.76□□□□□ -1.65
USP3-215ENST00000559771 CCDC90BQ9GZT6 254 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms