RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 IGHV2-70P01814 119 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 PRKACBP22694 351 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 CFHR2P36980 270 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 FUT6P51993 359 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 RPS25P62851 125 aaKnown RBP18.23■□□□□ 0.51
SNX1-206ENST00000559389 HAGHLQ6PII5 290 aaPredicted RBP18.23■□□□□ 0.51
SNX1-206ENST00000559389 PEG10Q86TG7 708 aaKnown RBP18.23■□□□□ 0.51
SNX1-206ENST00000559389 ZNF573Q86YE8 665 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 RAB1CQ92928 201 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 BORCS8Q96FH0 119 aa18.23■□□□□ 0.51
SNX1-206ENST00000559389 SF3B6Q9Y3B4 125 aaKnown RBP18.23■□□□□ 0.51
SNX1-206ENST00000559389 A0A087WXM4 84 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 IGHV4-61A0A0C4DH41 118 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 H7C1Q1 480 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 J3QT63 122 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 INMTO95050 263 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 MPZP25189 248 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 PSMA1P25786 263 aaKnown RBP18.22■□□□□ 0.51
SNX1-206ENST00000559389 MAPK3P27361 379 aaPredicted RBP18.22■□□□□ 0.51
SNX1-206ENST00000559389 PSMB9P28065 219 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 BTG1P62324 171 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 INSL4Q14641 139 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 GCSAMQ8N6F7 178 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 OR51A2Q8NGJ7 313 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 LRRC29Q8WV35 223 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 AQP3Q92482 292 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 COX4I2Q96KJ9 171 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 METTL17Q9H7H0 456 aaPredicted RBP18.22■□□□□ 0.51
SNX1-206ENST00000559389 NDUFB11Q9NX14 153 aa18.22■□□□□ 0.51
SNX1-206ENST00000559389 TRIM64CA6NLI5 447 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 SRRM5B3KS81 715 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 FSTL3O95633 263 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 LHBP01229 141 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 IGFBP3P17936 291 aaPredicted RBP18.21■□□□□ 0.51
SNX1-206ENST00000559389 EGR1P18146 543 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 RAB3AP20336 220 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 USF1P22415 310 aaPredicted RBP18.21■□□□□ 0.51
SNX1-206ENST00000559389 GABRA5P31644 462 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 HAAOP46952 286 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 HOXA4Q00056 320 aaPredicted RBP18.21■□□□□ 0.51
SNX1-206ENST00000559389 LOXL1Q08397 574 aaPredicted RBP18.21■□□□□ 0.51
SNX1-206ENST00000559389 ZMYND11Q15326 602 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 TRAM1Q15629 374 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 ACSM3Q53FZ2 586 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 FAM201AQ5SY85 155 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 UNQ9370/PRO34162Q6UXP9 181 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 LHFPL2Q6ZUX7 228 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 CALHM1Q8IU99 346 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 CIARTQ8N365 385 aaPredicted RBP18.21■□□□□ 0.51
SNX1-206ENST00000559389 OR10Z1Q8NGY1 313 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 ORAI1Q96D31 301 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 OTOGQ6ZRI0 2925 aa18.21■□□□□ 0.51
SNX1-206ENST00000559389 TRAV8-7A0A075B6U6 113 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 WNT9BO14905 357 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 PIN1P1O15428 100 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 RHBDL1O75783 438 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 OCMP0CE72 109 aaPredicted RBP18.2■□□□□ 0.5
SNX1-206ENST00000559389 CD80P33681 288 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 RBP2P50120 134 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 PPP3R1P63098 170 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 NEDD8Q15843 81 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 SYT6Q5T7P8 510 aaPredicted RBP18.2■□□□□ 0.5
SNX1-206ENST00000559389 TMEM203Q969S6 136 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 MUL1Q969V5 352 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 PKIBQ9C010 78 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 NEK6Q9HC98 313 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 NOX4Q9NPH5 578 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 POLDIP2Q9Y2S7 368 aa18.2■□□□□ 0.5
SNX1-206ENST00000559389 PPIAL4EA0A075B759 164 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 ISPDA4D126 451 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 PPIAL4DF5H284 164 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.19■□□□□ 0.5
SNX1-206ENST00000559389 CCRL2O00421 344 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 GPX5O75715 221 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 RGS9O75916 674 aaPredicted RBP18.19■□□□□ 0.5
SNX1-206ENST00000559389 HCKP08631 526 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 SMIM18P0DKX4 95 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 PPIAL4FP0DN26 164 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 CR1P17927 2039 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 MDH2P40926 338 aaKnown RBP18.19■□□□□ 0.5
SNX1-206ENST00000559389 ATP1B3P54709 279 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 IL24Q13007 206 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 TMEM155Q4W5P6 130 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 CRIP3Q6Q6R5 217 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 ANGPTL5Q86XS5 388 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 CLDND2Q8NHS1 167 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 NARFLQ9H6Q4 476 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 CKLFQ9UBR5 152 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 PPIAL4AQ9Y536 164 aa18.19■□□□□ 0.5
SNX1-206ENST00000559389 TEX15Q9BXT5 2789 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 A0A1W2PPK0 400 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 LGALS8O00214 317 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 SYNGR1O43759 233 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 ZNF205O95201 554 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 GP2P55259 537 aaKnown RBP18.18■□□□□ 0.5
SNX1-206ENST00000559389 MTCP1P56278 107 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 FABP5Q01469 135 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 FAM27D1Q5T7N8 215 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 TMEM91Q6ZNR0 172 aa18.18■□□□□ 0.5
SNX1-206ENST00000559389 LRRC28Q86X40 367 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms